Analysis of interatomic Contacts of Structural Units in PDB entry:
3AUJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3AUJ entry

There are 6 chains in PDB entry 3AUJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 552
B
 GLY 46LEU 224
G
 SER 35ASP 173
L
 MET 1ASN 551
E
 ASP 45LEU 224
M
 ARG 36ASP 173
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 98 helices in PDB entry 3AUJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 11Right-handed alpha
Helix 2
2
A
12 17Right-handed 310
Helix 3
3
A
23 27Right-handed 310
Helix 4
4
A
57 59Right-handed 310
Helix 5
5
A
60 70Right-handed alpha
Helix 6
6
A
72 74Right-handed 310
Helix 7
7
A
75 82Right-handed alpha
Helix 8
8
A
83 93Right-handed alpha
Helix 9
9
A
97 106Right-handed alpha
Helix 10
10
A
109 118Right-handed alpha
Helix 11
11
A
121 133Right-handed alpha
Helix 12
12
A
150 165Right-handed alpha
Helix 13
13
A
175 177Right-handed 310
Helix 14
14
A
178 194Right-handed alpha
Helix 15
15
A
204 214Right-handed alpha
Helix 16
16
A
228 235Right-handed alpha
Helix 17
17
A
238 252Right-handed alpha
Helix 18
18
A
263 268Right-handed alpha
Helix 19
19
A
275 291Right-handed alpha
Helix 20
20
A
299 302Right-handed 310
Helix 21
21
A
303 309Right-handed alpha
Helix 22
22
A
311 326Right-handed alpha
Helix 23
23
A
341 354Right-handed alpha
Helix 24
24
A
368 372Right-handed 310
Helix 25
25
A
380 382Right-handed 310
Helix 26
26
A
383 395Right-handed alpha
Helix 27
27
A
404 427Right-handed alpha
Helix 28
28
A
432 442Right-handed alpha
Helix 29
29
A
444 448Right-handed 310
Helix 30
30
A
452 466Right-handed alpha
Helix 31
31
A
470 480Right-handed alpha
Helix 32
32
A
482 499Right-handed alpha
Helix 33
33
A
500 503Right-handed 310
Helix 34
34
A
534 543Right-handed alpha
Helix 35
35
B
83 98Right-handed alpha
Helix 36
36
B
112 122Right-handed alpha
Helix 37
37
B
156 160Right-handed 310
Helix 38
38
B
161 177Right-handed alpha
Helix 39
39
B
191 209Right-handed alpha
Helix 40
40
G
39 43Right-handed 310
Helix 41
41
G
44 49Right-handed alpha
Helix 42
42
G
50 53Right-handed 310
Helix 43
43
G
60 64Right-handed 310
Helix 44
44
G
65 71Right-handed alpha
Helix 45
45
G
82 96Right-handed alpha
Helix 46
46
G
98 112Right-handed alpha
Helix 47
47
G
115 127Right-handed alpha
Helix 48
48
G
132 148Right-handed alpha
Helix 49
49
G
149 166Right-handed alpha
Helix 50
50
L
3 11Right-handed alpha
Helix 51
51
L
12 17Right-handed 310
Helix 52
52
L
23 27Right-handed 310
Helix 53
53
L
57 59Right-handed 310
Helix 54
54
L
60 70Right-handed alpha
Helix 55
55
L
75 82Right-handed alpha
Helix 56
56
L
83 93Right-handed alpha
Helix 57
57
L
97 106Right-handed alpha
Helix 58
58
L
109 118Right-handed alpha
Helix 59
59
L
121 133Right-handed alpha
Helix 60
60
L
150 165Right-handed alpha
Helix 61
61
L
175 177Right-handed 310
Helix 62
62
L
178 194Right-handed alpha
Helix 63
63
L
204 214Right-handed alpha
Helix 64
64
L
228 235Right-handed alpha
Helix 65
65
L
238 252Right-handed alpha
Helix 66
66
L
263 268Right-handed alpha
Helix 67
67
L
275 291Right-handed alpha
Helix 68
68
L
299 303Right-handed 310
Helix 69
69
L
305 309Right-handed 310
Helix 70
70
L
311 326Right-handed alpha
Helix 71
71
L
341 354Right-handed alpha
Helix 72
72
L
368 372Right-handed 310
Helix 73
73
L
380 382Right-handed 310
Helix 74
74
L
383 395Right-handed alpha
Helix 75
75
L
404 427Right-handed alpha
Helix 76
76
L
432 442Right-handed alpha
Helix 77
77
L
444 448Right-handed 310
Helix 78
78
L
452 466Right-handed alpha
Helix 79
79
L
470 479Right-handed alpha
Helix 80
80
L
482 499Right-handed alpha
Helix 81
81
L
500 503Right-handed 310
Helix 82
82
L
534 543Right-handed alpha
Helix 83
83
E
83 97Right-handed alpha
Helix 84
84
E
112 122Right-handed alpha
Helix 85
85
E
156 160Right-handed 310
Helix 86
86
E
161 177Right-handed alpha
Helix 87
87
E
191 209Right-handed alpha
Helix 88
88
M
39 43Right-handed 310
Helix 89
89
M
44 49Right-handed alpha
Helix 90
90
M
50 53Right-handed 310
Helix 91
91
M
60 64Right-handed 310
Helix 92
92
M
65 71Right-handed alpha
Helix 93
93
M
75 79Right-handed 310
Helix 94
94
M
82 96Right-handed alpha
Helix 95
95
M
98 112Right-handed alpha
Helix 96
96
M
115 127Right-handed alpha
Helix 97
97
M
132 148Right-handed alpha
Helix 98
98
M
149 166Right-handed alpha
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There are 12 sheets in PDB entry 3AUJ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 20first strand
Strand 2
L
547 548parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
41 44first strand
Strand 2
A
47 51anti-parallel
Strand 3
A
54 55anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
198 201first strand
Strand 2
A
168 171parallel
Strand 3
A
141 143parallel
Strand 4
A
362 365parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
219 224first strand
Strand 2
A
255 259parallel
Strand 3
A
294 296parallel
Strand 4
A
329 331parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
507 509first strand
Strand 2
A
513 515anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
547 548first strand
Strand 2
L
19 20parallel
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There are 7 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 53first strand
Strand 2
B
218 222anti-parallel
Strand 3
B
101 106anti-parallel
Strand 4
B
62 67parallel
Strand 5
B
128 132parallel
Strand 6
B
138 142anti-parallel
Strand 7
B
152 154anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
41 44first strand
Strand 2
L
47 51anti-parallel
Strand 3
L
54 55anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
198 202first strand
Strand 2
L
168 172parallel
Strand 3
L
141 143parallel
Strand 4
L
362 365parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
219 224first strand
Strand 2
L
255 259parallel
Strand 3
L
294 296parallel
Strand 4
L
329 331parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
507 509first strand
Strand 2
L
513 515anti-parallel
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There are 7 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
48 53first strand
Strand 2
E
218 222anti-parallel
Strand 3
E
101 106anti-parallel
Strand 4
E
62 67parallel
Strand 5
E
128 132parallel
Strand 6
E
138 142anti-parallel
Strand 7
E
152 154anti-parallel
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