Analysis of interatomic Contacts of Structural Units in PDB entry:
3AUO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3AUO entry

There are 4 chains in PDB entry 3AUO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ARG 572
B
 MET 1ARG 572
D
 G 1 C 28
E
 G 1 C 28
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 61 helices in PDB entry 3AUO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 20Right-handed alpha
Helix 2
2
A
23 40Right-handed alpha
Helix 3
3
A
43 49Right-handed alpha
Helix 4
4
A
50 55Right-handed 310
Helix 5
5
A
63 76Right-handed alpha
Helix 6
6
A
78 88Right-handed alpha
Helix 7
7
A
89 96Right-handed alpha
Helix 8
8
A
101 114Right-handed alpha
Helix 9
9
A
117 128Right-handed alpha
Helix 10
10
A
137 154Right-handed alpha
Helix 11
11
A
160 176Right-handed alpha
Helix 12
12
A
186 191Right-handed alpha
Helix 13
13
A
207 217Right-handed alpha
Helix 14
14
A
248 250Right-handed 310
Helix 15
15
A
251 261Right-handed alpha
Helix 16
16
A
262 276Right-handed alpha
Helix 17
17
A
296 304Right-handed alpha
Helix 18
18
A
310 314Right-handed 310
Helix 19
19
A
318 325Right-handed alpha
Helix 20
20
A
333 337Right-handed 310
Helix 21
21
A
353 365Right-handed alpha
Helix 22
22
A
376 379Right-handed 310
Helix 23
23
A
388 404Right-handed alpha
Helix 24
24
A
425 431Right-handed alpha
Helix 25
25
A
446 460Right-handed alpha
Helix 26
26
A
483 494Right-handed alpha
Helix 27
27
A
510 520Right-handed alpha
Helix 28
28
A
532 537Right-handed 310
Helix 29
29
A
538 549Right-handed alpha
Helix 30
30
A
561 571Right-handed alpha
Helix 31
31
B
2 21Right-handed alpha
Helix 32
32
B
23 40Right-handed alpha
Helix 33
33
B
43 49Right-handed alpha
Helix 34
34
B
51 56Right-handed alpha
Helix 35
35
B
62 76Right-handed alpha
Helix 36
36
B
78 88Right-handed alpha
Helix 37
37
B
90 96Right-handed alpha
Helix 38
38
B
101 113Right-handed alpha
Helix 39
39
B
117 128Right-handed alpha
Helix 40
40
B
129 132Right-handed 310
Helix 41
41
B
137 150Right-handed alpha
Helix 42
42
B
160 177Right-handed alpha
Helix 43
43
B
186 191Right-handed alpha
Helix 44
44
B
207 217Right-handed alpha
Helix 45
45
B
248 250Right-handed 310
Helix 46
46
B
251 261Right-handed alpha
Helix 47
47
B
262 276Right-handed alpha
Helix 48
48
B
296 303Right-handed alpha
Helix 49
49
B
310 314Right-handed 310
Helix 50
50
B
318 325Right-handed alpha
Helix 51
51
B
333 337Right-handed 310
Helix 52
52
B
353 364Right-handed alpha
Helix 53
53
B
385 404Right-handed alpha
Helix 54
54
B
425 432Right-handed alpha
Helix 55
55
B
446 459Right-handed alpha
Helix 56
56
B
483 494Right-handed alpha
Helix 57
57
B
510 520Right-handed alpha
Helix 58
58
B
532 537Right-handed 310
Helix 59
59
B
538 549Right-handed alpha
Helix 60
60
B
556 560Right-handed 310
Helix 61
61
B
561 571Right-handed alpha
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There are 8 sheets in PDB entry 3AUO. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 159first strand
Strand 2
A
195 196anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
182 185first strand
Strand 2
A
199 204anti-parallel
Strand 3
A
241 247parallel
Strand 4
A
231 236anti-parallel
Strand 5
A
221 227anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
279 280first strand
Strand 2
A
285 287anti-parallel
Strand 3
A
290 293anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
339 343first strand
Strand 2
A
368 374parallel
Strand 3
A
407 415parallel
Strand 4
A
434 438parallel
Strand 5
A
465 466parallel
Strand 6
A
497 501parallel
Strand 7
A
524 527parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
158 159first strand
Strand 2
B
195 196anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
182 185first strand
Strand 2
B
199 204anti-parallel
Strand 3
B
241 247parallel
Strand 4
B
231 236anti-parallel
Strand 5
B
221 227anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
279 281first strand
Strand 2
B
284 287anti-parallel
Strand 3
B
290 293anti-parallel
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There are 7 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
339 343first strand
Strand 2
B
368 374parallel
Strand 3
B
407 415parallel
Strand 4
B
434 438parallel
Strand 5
B
465 466parallel
Strand 6
B
497 501parallel
Strand 7
B
524 527parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il