Analysis of interatomic Contacts of Structural Units in PDB entry:
3AUX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3AUX entry

There is 1 chain in PDB entry 3AUX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 1005
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 3AUX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
37 51Right-handed alpha
Helix 2
2
A
107 120Right-handed alpha
Helix 3
3
A
122 129Right-handed alpha
Helix 4
4
A
135 143Right-handed alpha
Helix 5
5
A
144 157Right-handed alpha
Helix 6
6
A
161 163Right-handed 310
Helix 7
7
A
164 172Right-handed alpha
Helix 8
8
A
173 177Right-handed 310
Helix 9
9
A
842 859Right-handed alpha
Helix 10
10
A
861 886Right-handed alpha
Helix 11
11
A
913 915Right-handed 310
Helix 12
12
A
916 937Right-handed alpha
Helix 13
13
A
953 966Right-handed alpha
Helix 14
14
A
979 985Right-handed 310
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There are 3 sheets in PDB entry 3AUX. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 22first strand
Strand 2
A
3 13anti-parallel
Strand 3
A
68 77anti-parallel
Strand 4
A
80 89anti-parallel
Strand 5
A
92 99anti-parallel
Strand 6
A
102 105anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 132first strand
Strand 2
A
942 946parallel
Strand 3
A
972 977parallel
Strand 4
A
26 31parallel
Strand 5
A
988 995parallel
Strand 6
A
998 1002anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
892 895first strand
Strand 2
A
901 905anti-parallel
Strand 3
A
908 911anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il