Analysis of interatomic Contacts of Structural Units in PDB entry:
3AUY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3AUY entry

There are 2 chains in PDB entry 3AUY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 1005
B
 MET 1GLY 1005
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 3AUY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
37 51Right-handed alpha
Helix 2
2
A
107 120Right-handed alpha
Helix 3
3
A
122 130Right-handed alpha
Helix 4
4
A
135 143Right-handed alpha
Helix 5
5
A
144 157Right-handed alpha
Helix 6
6
A
157 186Right-handed alpha
Helix 7
7
A
826 859Right-handed alpha
Helix 8
8
A
862 886Right-handed alpha
Helix 9
9
A
911 915Right-handed 310
Helix 10
10
A
916 937Right-handed alpha
Helix 11
11
A
953 967Right-handed alpha
Helix 12
12
A
979 986Right-handed 310
Helix 13
13
B
37 51Right-handed alpha
Helix 14
14
B
57 61Right-handed 310
Helix 15
15
B
107 120Right-handed alpha
Helix 16
16
B
122 130Right-handed alpha
Helix 17
17
B
135 143Right-handed alpha
Helix 18
18
B
144 157Right-handed alpha
Helix 19
19
B
157 188Right-handed alpha
Helix 20
20
B
838 858Right-handed alpha
Helix 21
21
B
861 869Right-handed alpha
Helix 22
22
B
871 886Right-handed alpha
Helix 23
23
B
913 915Right-handed 310
Helix 24
24
B
916 937Right-handed alpha
Helix 25
25
B
953 967Right-handed alpha
Helix 26
26
B
979 986Right-handed 310
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There are 6 sheets in PDB entry 3AUY. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 22first strand
Strand 2
A
3 13anti-parallel
Strand 3
A
68 77anti-parallel
Strand 4
A
80 89anti-parallel
Strand 5
A
92 99anti-parallel
Strand 6
A
102 105anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 132first strand
Strand 2
A
942 946parallel
Strand 3
A
972 977parallel
Strand 4
A
26 32parallel
Strand 5
A
988 994parallel
Strand 6
A
999 1004anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
893 895first strand
Strand 2
A
901 905anti-parallel
Strand 3
A
908 910anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
16 22first strand
Strand 2
B
3 13anti-parallel
Strand 3
B
68 77anti-parallel
Strand 4
B
80 89anti-parallel
Strand 5
B
92 99anti-parallel
Strand 6
B
102 105anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
131 132first strand
Strand 2
B
942 946parallel
Strand 3
B
972 977parallel
Strand 4
B
26 32parallel
Strand 5
B
988 994parallel
Strand 6
B
999 1003anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
892 896first strand
Strand 2
B
900 905anti-parallel
Strand 3
B
908 911anti-parallel
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