Analysis of interatomic Contacts of Structural Units in PDB entry:
3AW8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3AW8 entry

There are 2 chains in PDB entry 3AW8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 366
B
 MET 1GLU 366
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 3AW8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 19Right-handed alpha
Helix 2
2
A
20 22Right-handed 310
Helix 3
3
A
34 39Right-handed 310
Helix 4
4
A
49 58Right-handed alpha
Helix 5
5
A
71 82Right-handed alpha
Helix 6
6
A
87 95Right-handed alpha
Helix 7
7
A
96 107Right-handed alpha
Helix 8
8
A
119 128Right-handed alpha
Helix 9
9
A
153 162Right-handed alpha
Helix 10
10
A
219 238Right-handed alpha
Helix 11
11
A
264 268Right-handed 310
Helix 12
12
A
269 274Right-handed alpha
Helix 13
13
A
277 288Right-handed alpha
Helix 14
14
A
311 317Right-handed alpha
Helix 15
15
A
345 358Right-handed alpha
Helix 16
16
B
8 19Right-handed alpha
Helix 17
17
B
20 22Right-handed 310
Helix 18
18
B
34 39Right-handed 310
Helix 19
19
B
49 58Right-handed alpha
Helix 20
20
B
71 80Right-handed alpha
Helix 21
21
B
87 95Right-handed alpha
Helix 22
22
B
96 108Right-handed alpha
Helix 23
23
B
119 128Right-handed alpha
Helix 24
24
B
153 162Right-handed alpha
Helix 25
25
B
219 237Right-handed alpha
Helix 26
26
B
264 268Right-handed 310
Helix 27
27
B
269 274Right-handed alpha
Helix 28
28
B
277 288Right-handed alpha
Helix 29
29
B
311 317Right-handed alpha
Helix 30
30
B
345 357Right-handed alpha
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There are 8 sheets in PDB entry 3AW8. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
41 44first strand
Strand 2
A
25 29parallel
Strand 3
A
2 5parallel
Strand 4
A
62 65parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
114 117first strand
Strand 2
A
169 173anti-parallel
Strand 3
A
134 138anti-parallel
Strand 4
A
148 151anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
193 195first strand
Strand 2
A
179 187anti-parallel
Strand 3
A
241 250anti-parallel
Strand 4
A
253 260anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
193 195first strand
Strand 2
A
179 187anti-parallel
Strand 3
A
199 204anti-parallel
Strand 4
A
207 213anti-parallel
Strand 5
A
299 306anti-parallel
Strand 6
A
335 343anti-parallel
Strand 7
A
321 325anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
41 44first strand
Strand 2
B
25 29parallel
Strand 3
B
2 5parallel
Strand 4
B
62 65parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
114 117first strand
Strand 2
B
169 173anti-parallel
Strand 3
B
134 138anti-parallel
Strand 4
B
148 151anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
193 195first strand
Strand 2
B
179 187anti-parallel
Strand 3
B
241 250anti-parallel
Strand 4
B
253 260anti-parallel
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There are 7 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
193 195first strand
Strand 2
B
179 187anti-parallel
Strand 3
B
199 203anti-parallel
Strand 4
B
208 213anti-parallel
Strand 5
B
299 306anti-parallel
Strand 6
B
335 343anti-parallel
Strand 7
B
321 325anti-parallel
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