Analysis of interatomic Contacts of Structural Units in PDB entry:
3AWE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3AWE entry

There are 3 chains in PDB entry 3AWE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 257ASP 572
B
 ARG 254ASP 572
C
 ARG 253ASP 572
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 3AWE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
288 300Right-handed alpha
Helix 2
2
A
316 321Right-handed 310
Helix 3
3
A
336 354Right-handed alpha
Helix 4
4
A
367 381Right-handed alpha
Helix 5
5
A
386 399Right-handed alpha
Helix 6
6
A
405 410Right-handed alpha
Helix 7
7
A
412 429Right-handed alpha
Helix 8
8
A
521 525Right-handed 310
Helix 9
9
A
534 536Right-handed 310
Helix 10
10
A
546 548Right-handed 310
Helix 11
11
A
553 557Right-handed 310
Helix 12
12
B
288 300Right-handed alpha
Helix 13
13
B
316 321Right-handed 310
Helix 14
14
B
336 354Right-handed alpha
Helix 15
15
B
367 381Right-handed alpha
Helix 16
16
B
386 399Right-handed alpha
Helix 17
17
B
405 410Right-handed alpha
Helix 18
18
B
412 429Right-handed alpha
Helix 19
19
B
521 525Right-handed 310
Helix 20
20
B
534 536Right-handed 310
Helix 21
21
B
546 548Right-handed 310
Helix 22
22
B
553 557Right-handed 310
Helix 23
23
C
288 300Right-handed alpha
Helix 24
24
C
316 321Right-handed 310
Helix 25
25
C
336 354Right-handed alpha
Helix 26
26
C
367 381Right-handed alpha
Helix 27
27
C
386 399Right-handed alpha
Helix 28
28
C
405 410Right-handed alpha
Helix 29
29
C
412 429Right-handed alpha
Helix 30
30
C
521 525Right-handed 310
Helix 31
31
C
546 548Right-handed 310
Helix 32
32
C
553 557Right-handed 310
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There are 10 sheets in PDB entry 3AWE. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
264 266first strand
Strand 2
A
271 274anti-parallel
Strand 3
A
358 362parallel
Strand 4
A
304 310parallel
Strand 5
A
324 329parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
482 487first strand
Strand 2
A
492 497anti-parallel
Strand 3
A
440 447anti-parallel
Strand 4
A
565 571anti-parallel
Strand 5
A
540 544anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
469 475first strand
Strand 2
A
460 466anti-parallel
Strand 3
A
506 513anti-parallel
Strand 4
A
527 532anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
255 257first strand
Strand 2
B
260 262anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
264 266first strand
Strand 2
B
271 274anti-parallel
Strand 3
B
358 362parallel
Strand 4
B
304 310parallel
Strand 5
B
324 329parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
482 487first strand
Strand 2
B
492 497anti-parallel
Strand 3
B
440 447anti-parallel
Strand 4
B
565 571anti-parallel
Strand 5
B
540 544anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
469 475first strand
Strand 2
B
460 466anti-parallel
Strand 3
B
506 513anti-parallel
Strand 4
B
527 532anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
264 266first strand
Strand 2
C
271 274anti-parallel
Strand 3
C
358 362parallel
Strand 4
C
304 310parallel
Strand 5
C
324 329parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
482 487first strand
Strand 2
C
492 497anti-parallel
Strand 3
C
440 447anti-parallel
Strand 4
C
565 571anti-parallel
Strand 5
C
540 544anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
469 475first strand
Strand 2
C
460 466anti-parallel
Strand 3
C
506 513anti-parallel
Strand 4
C
527 532anti-parallel
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