Analysis of interatomic Contacts of Structural Units in PDB entry:
3AWI

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3AWI entry

There are 3 chains in PDB entry 3AWI (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 35	GLY 662
B	LEU 35	GLY 662
C	LEU 35	ARG 51

There are155 helices in PDB entry 3AWI. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	35	46	Right-handed alpha
Helix 2	2	A	47	55	Right-handed alpha
Helix 3	3	A	70	87	Right-handed alpha
Helix 4	4	A	107	115	Right-handed alpha
Helix 5	5	A	116	119	Right-handed 310
Helix 6	6	A	120	130	Right-handed alpha
Helix 7	7	A	156	164	Right-handed alpha
Helix 8	8	A	165	169	Right-handed 310
Helix 9	9	A	190	200	Right-handed alpha
Helix 10	10	A	213	223	Right-handed alpha
Helix 11	11	A	254	258	Right-handed 310
Helix 12	12	A	273	286	Right-handed alpha
Helix 13	13	A	302	306	Right-handed 310
Helix 14	14	A	319	340	Right-handed alpha
Helix 15	15	A	357	370	Right-handed alpha
Helix 16	16	A	381	390	Right-handed alpha
Helix 17	17	A	407	422	Right-handed alpha
Helix 18	18	A	461	465	Right-handed 310
Helix 19	19	A	491	495	Right-handed 310
Helix 20	20	A	531	546	Right-handed alpha
Helix 21	21	A	549	554	Right-handed alpha
Helix 22	22	A	570	574	Right-handed 310
Helix 23	23	A	582	589	Right-handed alpha
Helix 24	24	A	593	597	Right-handed 310
Helix 25	25	A	618	635	Right-handed alpha
Helix 26	26	A	642	650	Right-handed alpha
Helix 27	27	A	652	661	Right-handed alpha
Helix 28	28	B	35	43	Right-handed alpha
Helix 29	29	B	44	46	Right-handed 310
Helix 30	30	B	47	55	Right-handed alpha
Helix 31	31	B	70	87	Right-handed alpha
Helix 32	32	B	106	115	Right-handed alpha
Helix 33	33	B	116	119	Right-handed 310
Helix 34	34	B	120	130	Right-handed alpha
Helix 35	35	B	156	161	Right-handed alpha
Helix 36	36	B	162	164	Right-handed 310
Helix 37	37	B	165	169	Right-handed 310
Helix 38	38	B	185	189	Right-handed 310
Helix 39	39	B	190	200	Right-handed alpha
Helix 40	40	B	213	223	Right-handed alpha
Helix 41	41	B	254	258	Right-handed 310
Helix 42	42	B	273	286	Right-handed alpha
Helix 43	43	B	302	306	Right-handed 310
Helix 44	44	B	319	340	Right-handed alpha
Helix 45	45	B	357	370	Right-handed alpha
Helix 46	46	B	381	390	Right-handed alpha
Helix 47	47	B	407	422	Right-handed alpha
Helix 48	48	B	461	472	Right-handed 310
Helix 49	49	B	531	546	Right-handed alpha
Helix 50	50	B	549	554	Right-handed alpha
Helix 51	51	B	582	590	Right-handed alpha
Helix 52	52	B	618	635	Right-handed alpha
Helix 53	53	B	642	649	Right-handed alpha
Helix 54	54	B	652	661	Right-handed alpha
Helix 55	55	C	35	46	Right-handed alpha
Helix 56	56	C	47	55	Right-handed alpha
Helix 57	57	C	70	87	Right-handed alpha
Helix 58	58	C	106	115	Right-handed alpha
Helix 59	59	C	116	119	Right-handed 310
Helix 60	60	C	120	131	Right-handed alpha
Helix 61	61	C	156	161	Right-handed alpha
Helix 62	62	C	162	164	Right-handed 310
Helix 63	63	C	165	169	Right-handed 310
Helix 64	64	C	185	189	Right-handed 310
Helix 65	65	C	190	200	Right-handed alpha
Helix 66	66	C	213	223	Right-handed alpha
Helix 67	67	C	254	258	Right-handed 310
Helix 68	68	C	273	286	Right-handed alpha
Helix 69	69	C	302	306	Right-handed 310
Helix 70	70	C	321	340	Right-handed alpha
Helix 71	71	C	357	370	Right-handed alpha
Helix 72	72	C	381	390	Right-handed alpha
Helix 73	73	C	407	422	Right-handed alpha
Helix 74	74	C	461	467	Right-handed 310
Helix 75	75	C	531	546	Right-handed alpha
Helix 76	76	C	551	555	Right-handed 310
Helix 77	77	C	582	590	Right-handed alpha
Helix 78	78	C	592	597	Right-handed alpha
Helix 79	79	C	618	635	Right-handed alpha
Helix 80	80	C	642	650	Right-handed alpha
Helix 81	81	C	652	661	Right-handed alpha
Helix 82	82	D	34	42	Right-handed alpha
Helix 83	83	D	47	55	Right-handed alpha
Helix 84	84	D	70	87	Right-handed alpha
Helix 85	85	D	106	115	Right-handed alpha
Helix 86	86	D	116	119	Right-handed 310
Helix 87	87	D	120	131	Right-handed alpha
Helix 88	88	D	156	162	Right-handed alpha
Helix 89	89	D	163	164	Right-handed 310
Helix 90	90	D	165	169	Right-handed 310
Helix 91	91	D	185	189	Right-handed 310
Helix 92	92	D	190	200	Right-handed alpha
Helix 93	93	D	213	224	Right-handed alpha
Helix 94	94	D	273	285	Right-handed alpha
Helix 95	95	D	302	306	Right-handed 310
Helix 96	96	D	319	339	Right-handed alpha
Helix 97	97	D	357	370	Right-handed alpha
Helix 98	98	D	381	389	Right-handed alpha
Helix 99	99	D	407	422	Right-handed alpha
Helix 100	100	D	461	472	Right-handed 310
Helix 101	101	D	531	546	Right-handed alpha
Helix 102	102	D	549	554	Right-handed alpha
Helix 103	103	D	582	590	Right-handed alpha
Helix 104	104	D	591	595	Right-handed 310
Helix 105	105	D	618	635	Right-handed alpha
Helix 106	106	D	642	650	Right-handed alpha
Helix 107	107	D	652	660	Right-handed alpha
Helix 108	108	E	35	46	Right-handed alpha
Helix 109	109	E	47	55	Right-handed alpha
Helix 110	110	E	70	87	Right-handed alpha
Helix 111	111	E	106	116	Right-handed alpha
Helix 112	112	E	117	119	Right-handed 310
Helix 113	113	E	120	131	Right-handed alpha
Helix 114	114	E	156	164	Right-handed alpha
Helix 115	115	E	165	169	Right-handed 310
Helix 116	116	E	185	189	Right-handed 310
Helix 117	117	E	190	200	Right-handed alpha
Helix 118	118	E	213	224	Right-handed alpha
Helix 119	119	E	273	286	Right-handed alpha
Helix 120	120	E	302	306	Right-handed 310
Helix 121	121	E	319	340	Right-handed alpha
Helix 122	122	E	357	370	Right-handed alpha
Helix 123	123	E	381	390	Right-handed alpha
Helix 124	124	E	407	422	Right-handed alpha
Helix 125	125	E	461	465	Right-handed 310
Helix 126	126	E	531	546	Right-handed alpha
Helix 127	127	E	549	554	Right-handed alpha
Helix 128	128	E	582	590	Right-handed alpha
Helix 129	129	E	618	636	Right-handed alpha
Helix 130	130	E	642	648	Right-handed alpha
Helix 131	131	E	652	660	Right-handed alpha
Helix 132	132	F	35	42	Right-handed alpha
Helix 133	133	F	47	55	Right-handed alpha
Helix 134	134	F	70	87	Right-handed alpha
Helix 135	135	F	106	111	Right-handed alpha
Helix 136	136	F	112	117	Right-handed alpha
Helix 137	137	F	120	131	Right-handed alpha
Helix 138	138	F	156	161	Right-handed alpha
Helix 139	139	F	165	169	Right-handed 310
Helix 140	140	F	185	189	Right-handed 310
Helix 141	141	F	190	200	Right-handed alpha
Helix 142	142	F	213	223	Right-handed alpha
Helix 143	143	F	273	285	Right-handed alpha
Helix 144	144	F	319	340	Right-handed alpha
Helix 145	145	F	357	369	Right-handed alpha
Helix 146	146	F	381	390	Right-handed alpha
Helix 147	147	F	407	422	Right-handed alpha
Helix 148	148	F	461	468	Right-handed 310
Helix 149	149	F	531	546	Right-handed alpha
Helix 150	150	F	550	555	Right-handed alpha
Helix 151	151	F	582	590	Right-handed alpha
Helix 152	152	F	615	617	Right-handed 310
Helix 153	153	F	618	635	Right-handed alpha
Helix 154	154	F	642	647	Right-handed alpha
Helix 155	155	F	652	659	Right-handed alpha

There are 39 sheets in PDB entry 3AWI. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	137	143	first strand
Strand 2	A	148	154	anti-parallel
Strand 3	A	94	101	parallel
Strand 4	A	59	64	parallel
Strand 5	A	172	177	parallel
Strand 6	A	201	209	parallel
Strand 7	A	239	243	anti-parallel
Strand 8	A	226	230	anti-parallel

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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	425	428	first strand
Strand 2	A	289	294	parallel
Strand 3	A	266	270	parallel
Strand 4	A	456	459	parallel
Strand 5	A	605	613	parallel
Strand 6	A	576	581	anti-parallel

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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	309	311	first strand
Strand 2	A	404	406	anti-parallel
Strand 3	A	346	347	anti-parallel

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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	378	380	first strand
Strand 2	A	397	400	anti-parallel
Strand 3	A	351	354	anti-parallel
Strand 4	A	498	500	parallel
Strand 5	A	504	505	anti-parallel
Strand 6	A	514	518	anti-parallel
Strand 7	A	477	487	anti-parallel
Strand 8	A	522	523	anti-parallel

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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	378	380	first strand
Strand 2	A	397	400	anti-parallel
Strand 3	A	351	354	anti-parallel
Strand 4	A	498	500	parallel
Strand 5	A	504	505	anti-parallel
Strand 6	A	514	518	anti-parallel
Strand 7	A	477	487	anti-parallel
Strand 8	A	562	569	anti-parallel

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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	432	437	first strand
Strand 2	A	442	446	anti-parallel
Strand 3	A	450	454	anti-parallel

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There are 8 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	137	143	first strand
Strand 2	B	148	154	anti-parallel
Strand 3	B	94	101	parallel
Strand 4	B	59	64	parallel
Strand 5	B	172	176	parallel
Strand 6	B	201	209	parallel
Strand 7	B	238	243	anti-parallel
Strand 8	B	226	231	anti-parallel

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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	425	428	first strand
Strand 2	B	289	294	parallel
Strand 3	B	266	270	parallel
Strand 4	B	456	459	parallel
Strand 5	B	605	613	parallel
Strand 6	B	576	581	anti-parallel

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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	309	311	first strand
Strand 2	B	404	406	anti-parallel
Strand 3	B	346	347	anti-parallel

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There are 8 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	378	380	first strand
Strand 2	B	397	400	anti-parallel
Strand 3	B	351	354	anti-parallel
Strand 4	B	498	500	parallel
Strand 5	B	504	505	anti-parallel
Strand 6	B	514	518	anti-parallel
Strand 7	B	477	487	anti-parallel
Strand 8	B	522	523	anti-parallel

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There are 8 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	378	380	first strand
Strand 2	B	397	400	anti-parallel
Strand 3	B	351	354	anti-parallel
Strand 4	B	498	500	parallel
Strand 5	B	504	505	anti-parallel
Strand 6	B	514	518	anti-parallel
Strand 7	B	477	487	anti-parallel
Strand 8	B	562	569	anti-parallel

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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	432	437	first strand
Strand 2	B	442	446	anti-parallel
Strand 3	B	450	454	anti-parallel

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There are 8 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	137	143	first strand
Strand 2	C	148	154	anti-parallel
Strand 3	C	94	101	parallel
Strand 4	C	59	64	parallel
Strand 5	C	172	177	parallel
Strand 6	C	201	209	parallel
Strand 7	C	238	243	anti-parallel
Strand 8	C	226	231	anti-parallel

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There are 6 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	425	427	first strand
Strand 2	C	289	294	parallel
Strand 3	C	266	271	parallel
Strand 4	C	456	459	parallel
Strand 5	C	605	613	parallel
Strand 6	C	576	581	anti-parallel

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There are 3 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	309	311	first strand
Strand 2	C	404	406	anti-parallel
Strand 3	C	346	347	anti-parallel

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There are 8 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	378	380	first strand
Strand 2	C	397	400	anti-parallel
Strand 3	C	351	354	anti-parallel
Strand 4	C	498	500	parallel
Strand 5	C	504	505	anti-parallel
Strand 6	C	514	518	anti-parallel
Strand 7	C	477	487	anti-parallel
Strand 8	C	522	523	anti-parallel

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There are 8 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	378	380	first strand
Strand 2	C	397	400	anti-parallel
Strand 3	C	351	354	anti-parallel
Strand 4	C	498	500	parallel
Strand 5	C	504	505	anti-parallel
Strand 6	C	514	518	anti-parallel
Strand 7	C	477	487	anti-parallel
Strand 8	C	562	569	anti-parallel

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There are 3 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	432	437	first strand
Strand 2	C	442	446	anti-parallel
Strand 3	C	450	454	anti-parallel

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There are 8 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	137	143	first strand
Strand 2	D	148	154	anti-parallel
Strand 3	D	94	101	parallel
Strand 4	D	59	64	parallel
Strand 5	D	172	177	parallel
Strand 6	D	201	209	parallel
Strand 7	D	239	243	anti-parallel
Strand 8	D	226	230	anti-parallel

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There are 6 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	425	428	first strand
Strand 2	D	289	294	parallel
Strand 3	D	266	270	parallel
Strand 4	D	456	459	parallel
Strand 5	D	605	613	parallel
Strand 6	D	576	581	anti-parallel

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There are 3 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	309	311	first strand
Strand 2	D	404	406	anti-parallel
Strand 3	D	346	347	anti-parallel

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There are 5 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	378	380	first strand
Strand 2	D	397	400	anti-parallel
Strand 3	D	351	353	anti-parallel
Strand 4	D	498	500	parallel
Strand 5	D	504	505	anti-parallel

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There are 3 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	432	437	first strand
Strand 2	D	442	446	anti-parallel
Strand 3	D	450	454	anti-parallel

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There are 3 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	514	518	first strand
Strand 2	D	477	487	anti-parallel
Strand 3	D	522	523	anti-parallel

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There are 3 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	514	518	first strand
Strand 2	D	477	487	anti-parallel
Strand 3	D	562	569	anti-parallel

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There are 8 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	137	143	first strand
Strand 2	E	148	154	anti-parallel
Strand 3	E	94	101	parallel
Strand 4	E	59	64	parallel
Strand 5	E	172	177	parallel
Strand 6	E	201	209	parallel
Strand 7	E	238	243	anti-parallel
Strand 8	E	226	231	anti-parallel

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There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	425	427	first strand
Strand 2	E	289	293	parallel
Strand 3	E	266	270	parallel
Strand 4	E	456	459	parallel
Strand 5	E	605	613	parallel
Strand 6	E	576	581	anti-parallel

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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	309	311	first strand
Strand 2	E	404	406	anti-parallel
Strand 3	E	346	347	anti-parallel

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There are 5 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	378	380	first strand
Strand 2	E	397	400	anti-parallel
Strand 3	E	351	354	anti-parallel
Strand 4	E	498	500	parallel
Strand 5	E	504	505	anti-parallel

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There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	432	437	first strand
Strand 2	E	442	446	anti-parallel
Strand 3	E	451	454	anti-parallel

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There are 3 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	514	518	first strand
Strand 2	E	477	487	anti-parallel
Strand 3	E	522	523	anti-parallel

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There are 3 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	514	518	first strand
Strand 2	E	477	487	anti-parallel
Strand 3	E	562	569	anti-parallel

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There are 8 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	137	143	first strand
Strand 2	F	148	154	anti-parallel
Strand 3	F	94	101	parallel
Strand 4	F	59	64	parallel
Strand 5	F	174	176	parallel
Strand 6	F	206	209	parallel
Strand 7	F	240	243	anti-parallel
Strand 8	F	226	228	anti-parallel

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There are 6 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	425	427	first strand
Strand 2	F	289	293	parallel
Strand 3	F	266	270	parallel
Strand 4	F	456	459	parallel
Strand 5	F	609	613	parallel
Strand 6	F	576	579	anti-parallel

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There are 3 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	309	311	first strand
Strand 2	F	404	406	anti-parallel
Strand 3	F	346	347	anti-parallel

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There are 5 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	378	380	first strand
Strand 2	F	397	400	anti-parallel
Strand 3	F	351	354	anti-parallel
Strand 4	F	498	500	parallel
Strand 5	F	504	505	anti-parallel

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There are 3 strands in AK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	432	437	first strand
Strand 2	F	442	446	anti-parallel
Strand 3	F	451	454	anti-parallel

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There are 3 strands in AL sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	514	517	first strand
Strand 2	F	477	487	anti-parallel
Strand 3	F	522	523	anti-parallel

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There are 3 strands in AM sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	514	517	first strand
Strand 2	F	477	487	anti-parallel
Strand 3	F	561	569	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3AWI

Analysis of interatomic Contacts of Structural Units in PDB entry:
3AWI