Analysis of interatomic Contacts of Structural Units in PDB entry:
3AWN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3AWN entry

There is 1 chain in PDB entry 3AWN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1TRP 376
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 3AWN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 10Right-handed 310
Helix 2
2
A
19 37Right-handed alpha
Helix 3
3
A
49 57Right-handed alpha
Helix 4
4
A
68 78Right-handed alpha
Helix 5
5
A
90 92Right-handed 310
Helix 6
6
A
93 104Right-handed alpha
Helix 7
7
A
113 122Right-handed alpha
Helix 8
8
A
150 163Right-handed alpha
Helix 9
9
A
177 182Right-handed 310
Helix 10
10
A
185 211Right-handed alpha
Helix 11
11
A
221 227Right-handed alpha
Helix 12
12
A
229 235Right-handed 310
Helix 13
13
A
241 245Right-handed 310
Helix 14
14
A
247 254Right-handed alpha
Helix 15
15
A
257 261Right-handed 310
Helix 16
16
A
274 277Right-handed 310
Helix 17
17
A
298 301Right-handed 310
Helix 18
18
A
347 353Right-handed alpha
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There are 2 sheets in PDB entry 3AWN. Click on sheet of interest to get list of strands forming it: A, B,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
365 370first strand
Strand 2
A
358 362anti-parallel
Strand 3
A
14 18parallel
Strand 4
A
263 273anti-parallel
Strand 5
A
340 345anti-parallel
Strand 6
A
303 305anti-parallel
Strand 7
A
312 316anti-parallel
Strand 8
A
321 324anti-parallel
Strand 9
A
278 281anti-parallel
Strand 10
A
263 273anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 40first strand
Strand 2
A
237 238parallel
Strand 3
A
216 219parallel
Strand 4
A
168 174parallel
Strand 5
A
131 136parallel
Strand 6
A
107 111parallel
Strand 7
A
81 88parallel
Strand 8
A
62 66parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il