Analysis of interatomic Contacts of Structural Units in PDB entry:
3AZ9

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3AZ9 entry

There are 24 chains in PDB entry 3AZ9 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 84	SER 229
B	THR 85	SER 229
C	THR 85	LEU 228
D	ASP 84	ALA 227
E	ASP 84	LEU 228
F	ASP 84	SER 229
G	ASP 84	LYS 230
H	THR 85	SER 229
I	THR 85	LEU 228
J	ASP 84	ALA 227
K	ASP 84	LEU 228
L	ASP 84	SER 229
M	ASP 84	SER 229
N	THR 85	SER 229
O	THR 85	LEU 228
P	ASP 84	ALA 227
Q	ASP 84	LEU 228
R	ASP 84	SER 229
S	ASP 84	SER 229
T	THR 85	SER 229
U	THR 85	LEU 228
V	ASP 84	ALA 227
W	ASP 84	LEU 228
X	ASP 88	SER 229

There are 74 helices in PDB entry 3AZ9. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	88	96	Right-handed alpha
Helix 2	2	A	127	132	Right-handed 310
Helix 3	3	A	141	161	Right-handed alpha
Helix 4	4	B	88	96	Right-handed alpha
Helix 5	5	B	129	133	Right-handed 310
Helix 6	6	B	141	161	Right-handed alpha
Helix 7	7	C	88	96	Right-handed alpha
Helix 8	8	C	127	133	Right-handed 310
Helix 9	9	C	141	161	Right-handed alpha
Helix 10	10	D	88	96	Right-handed alpha
Helix 11	11	D	127	133	Right-handed 310
Helix 12	12	D	141	161	Right-handed alpha
Helix 13	13	E	88	96	Right-handed alpha
Helix 14	14	E	129	133	Right-handed 310
Helix 15	15	E	141	161	Right-handed alpha
Helix 16	16	F	88	96	Right-handed alpha
Helix 17	17	F	127	132	Right-handed 310
Helix 18	18	F	141	161	Right-handed alpha
Helix 19	19	G	88	96	Right-handed alpha
Helix 20	20	G	127	133	Right-handed 310
Helix 21	21	G	141	161	Right-handed alpha
Helix 22	22	H	88	96	Right-handed alpha
Helix 23	23	H	127	133	Right-handed 310
Helix 24	24	H	141	161	Right-handed alpha
Helix 25	25	I	88	96	Right-handed alpha
Helix 26	26	I	127	133	Right-handed 310
Helix 27	27	I	141	161	Right-handed alpha
Helix 28	28	J	88	96	Right-handed alpha
Helix 29	29	J	127	133	Right-handed 310
Helix 30	30	J	141	161	Right-handed alpha
Helix 31	31	K	88	96	Right-handed alpha
Helix 32	32	K	127	133	Right-handed 310
Helix 33	33	K	141	161	Right-handed alpha
Helix 34	34	L	88	96	Right-handed alpha
Helix 35	35	L	127	133	Right-handed 310
Helix 36	36	L	141	161	Right-handed alpha
Helix 37	37	M	88	96	Right-handed alpha
Helix 38	38	M	127	132	Right-handed 310
Helix 39	39	M	141	161	Right-handed alpha
Helix 40	40	N	88	96	Right-handed alpha
Helix 41	41	N	127	133	Right-handed 310
Helix 42	42	N	141	161	Right-handed alpha
Helix 43	43	O	88	96	Right-handed alpha
Helix 44	44	O	127	133	Right-handed 310
Helix 45	45	O	141	161	Right-handed alpha
Helix 46	46	O	200	203	Right-handed 310
Helix 47	47	P	88	96	Right-handed alpha
Helix 48	48	P	127	133	Right-handed 310
Helix 49	49	P	141	161	Right-handed alpha
Helix 50	50	Q	88	96	Right-handed alpha
Helix 51	51	Q	127	133	Right-handed 310
Helix 52	52	Q	141	161	Right-handed alpha
Helix 53	53	R	88	96	Right-handed alpha
Helix 54	54	R	127	133	Right-handed 310
Helix 55	55	R	141	161	Right-handed alpha
Helix 56	56	S	88	96	Right-handed alpha
Helix 57	57	S	129	133	Right-handed 310
Helix 58	58	S	141	161	Right-handed alpha
Helix 59	59	T	88	96	Right-handed alpha
Helix 60	60	T	129	133	Right-handed 310
Helix 61	61	T	141	161	Right-handed alpha
Helix 62	62	T	200	203	Right-handed 310
Helix 63	63	U	88	96	Right-handed alpha
Helix 64	64	U	129	133	Right-handed 310
Helix 65	65	U	141	161	Right-handed alpha
Helix 66	66	V	88	96	Right-handed alpha
Helix 67	67	V	127	133	Right-handed 310
Helix 68	68	V	141	161	Right-handed alpha
Helix 69	69	W	88	96	Right-handed alpha
Helix 70	70	W	129	133	Right-handed 310
Helix 71	71	W	141	161	Right-handed alpha
Helix 72	72	X	88	96	Right-handed alpha
Helix 73	73	X	129	133	Right-handed 310
Helix 74	74	X	141	161	Right-handed alpha

There are 12 sheets in PDB entry 3AZ9. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 12 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	107	112	first strand
Strand 2	A	116	122	anti-parallel
Strand 3	A	188	199	anti-parallel
Strand 4	A	204	213	anti-parallel
Strand 5	A	216	228	anti-parallel
Strand 6	A	169	179	anti-parallel
Strand 7	B	169	179	anti-parallel
Strand 8	B	216	228	anti-parallel
Strand 9	B	204	213	anti-parallel
Strand 10	B	188	198	anti-parallel
Strand 11	B	116	122	anti-parallel
Strand 12	B	107	112	anti-parallel

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There are 12 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	107	112	first strand
Strand 2	C	116	122	anti-parallel
Strand 3	C	188	198	anti-parallel
Strand 4	C	204	213	anti-parallel
Strand 5	C	216	227	anti-parallel
Strand 6	C	170	179	anti-parallel
Strand 7	D	170	179	anti-parallel
Strand 8	D	216	227	anti-parallel
Strand 9	D	205	213	anti-parallel
Strand 10	D	188	198	anti-parallel
Strand 11	D	116	122	anti-parallel
Strand 12	D	107	112	anti-parallel

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There are 12 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	107	112	first strand
Strand 2	E	116	122	anti-parallel
Strand 3	E	188	198	anti-parallel
Strand 4	E	204	213	anti-parallel
Strand 5	E	216	227	anti-parallel
Strand 6	E	170	179	anti-parallel
Strand 7	F	169	179	anti-parallel
Strand 8	F	216	228	anti-parallel
Strand 9	F	204	213	anti-parallel
Strand 10	F	188	199	anti-parallel
Strand 11	F	116	122	anti-parallel
Strand 12	F	107	112	anti-parallel

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There are 12 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	107	112	first strand
Strand 2	G	116	122	anti-parallel
Strand 3	G	188	199	anti-parallel
Strand 4	G	204	213	anti-parallel
Strand 5	G	216	228	anti-parallel
Strand 6	G	169	179	anti-parallel
Strand 7	H	170	179	anti-parallel
Strand 8	H	216	227	anti-parallel
Strand 9	H	204	213	anti-parallel
Strand 10	H	188	199	anti-parallel
Strand 11	H	116	122	anti-parallel
Strand 12	H	107	112	anti-parallel

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There are 12 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	107	112	first strand
Strand 2	I	116	122	anti-parallel
Strand 3	I	188	198	anti-parallel
Strand 4	I	205	213	anti-parallel
Strand 5	I	216	227	anti-parallel
Strand 6	I	170	179	anti-parallel
Strand 7	J	170	179	anti-parallel
Strand 8	J	216	227	anti-parallel
Strand 9	J	205	213	anti-parallel
Strand 10	J	188	198	anti-parallel
Strand 11	J	116	122	anti-parallel
Strand 12	J	107	112	anti-parallel

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There are 12 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	107	112	first strand
Strand 2	K	116	122	anti-parallel
Strand 3	K	188	198	anti-parallel
Strand 4	K	205	213	anti-parallel
Strand 5	K	216	227	anti-parallel
Strand 6	K	170	179	anti-parallel
Strand 7	L	169	179	anti-parallel
Strand 8	L	216	228	anti-parallel
Strand 9	L	204	213	anti-parallel
Strand 10	L	188	199	anti-parallel
Strand 11	L	116	122	anti-parallel
Strand 12	L	107	112	anti-parallel

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There are 12 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	107	112	first strand
Strand 2	M	116	122	anti-parallel
Strand 3	M	188	198	anti-parallel
Strand 4	M	204	213	anti-parallel
Strand 5	M	216	227	anti-parallel
Strand 6	M	170	179	anti-parallel
Strand 7	N	169	179	anti-parallel
Strand 8	N	216	228	anti-parallel
Strand 9	N	204	213	anti-parallel
Strand 10	N	188	198	anti-parallel
Strand 11	N	116	122	anti-parallel
Strand 12	N	107	112	anti-parallel

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There are 12 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	107	112	first strand
Strand 2	O	116	122	anti-parallel
Strand 3	O	188	199	anti-parallel
Strand 4	O	204	213	anti-parallel
Strand 5	O	216	227	anti-parallel
Strand 6	O	170	179	anti-parallel
Strand 7	P	170	179	anti-parallel
Strand 8	P	216	227	anti-parallel
Strand 9	P	204	213	anti-parallel
Strand 10	P	188	199	anti-parallel
Strand 11	P	116	122	anti-parallel
Strand 12	P	107	112	anti-parallel

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There are 12 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	107	112	first strand
Strand 2	Q	116	122	anti-parallel
Strand 3	Q	188	198	anti-parallel
Strand 4	Q	204	213	anti-parallel
Strand 5	Q	216	227	anti-parallel
Strand 6	Q	170	179	anti-parallel
Strand 7	R	169	179	anti-parallel
Strand 8	R	216	228	anti-parallel
Strand 9	R	204	213	anti-parallel
Strand 10	R	188	199	anti-parallel
Strand 11	R	116	122	anti-parallel
Strand 12	R	107	112	anti-parallel

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There are 12 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	107	112	first strand
Strand 2	S	116	122	anti-parallel
Strand 3	S	188	199	anti-parallel
Strand 4	S	204	213	anti-parallel
Strand 5	S	216	227	anti-parallel
Strand 6	S	170	179	anti-parallel
Strand 7	T	170	179	anti-parallel
Strand 8	T	216	227	anti-parallel
Strand 9	T	204	213	anti-parallel
Strand 10	T	188	199	anti-parallel
Strand 11	T	116	122	anti-parallel
Strand 12	T	107	112	anti-parallel

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There are 12 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	107	112	first strand
Strand 2	U	116	122	anti-parallel
Strand 3	U	188	199	anti-parallel
Strand 4	U	204	213	anti-parallel
Strand 5	U	216	227	anti-parallel
Strand 6	U	170	179	anti-parallel
Strand 7	V	170	179	anti-parallel
Strand 8	V	216	227	anti-parallel
Strand 9	V	204	213	anti-parallel
Strand 10	V	188	199	anti-parallel
Strand 11	V	116	122	anti-parallel
Strand 12	V	107	112	anti-parallel

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There are 12 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	107	112	first strand
Strand 2	W	116	122	anti-parallel
Strand 3	W	188	198	anti-parallel
Strand 4	W	205	213	anti-parallel
Strand 5	W	216	227	anti-parallel
Strand 6	W	170	179	anti-parallel
Strand 7	X	169	179	anti-parallel
Strand 8	X	219	228	anti-parallel
Strand 9	X	205	210	anti-parallel
Strand 10	X	188	197	anti-parallel
Strand 11	X	116	122	anti-parallel
Strand 12	X	107	112	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3AZ9

Analysis of interatomic Contacts of Structural Units in PDB entry:
3AZ9