Analysis of interatomic Contacts of Structural Units in PDB entry:
3B0H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3B0H entry

There are 2 chains in PDB entry 3B0H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 20ARG 555
B
 GLU 21ARG 555
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 3B0H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
38 41Right-handed 310
Helix 2
2
A
45 54Right-handed alpha
Helix 3
3
A
57 62Right-handed alpha
Helix 4
4
A
63 69Right-handed alpha
Helix 5
5
A
72 78Right-handed alpha
Helix 6
6
A
79 88Right-handed alpha
Helix 7
7
A
89 93Right-handed 310
Helix 8
8
A
112 114Right-handed 310
Helix 9
9
A
119 132Right-handed alpha
Helix 10
10
A
133 136Right-handed 310
Helix 11
11
A
152 154Right-handed 310
Helix 12
12
A
155 166Right-handed alpha
Helix 13
13
A
197 210Right-handed alpha
Helix 14
14
A
215 219Right-handed 310
Helix 15
15
A
238 242Right-handed 310
Helix 16
16
A
284 300Right-handed alpha
Helix 17
17
A
304 308Right-handed 310
Helix 18
18
A
309 328Right-handed alpha
Helix 19
19
A
371 373Right-handed 310
Helix 20
20
A
377 392Right-handed alpha
Helix 21
21
A
413 419Right-handed alpha
Helix 22
22
A
420 426Right-handed alpha
Helix 23
23
A
432 437Right-handed alpha
Helix 24
24
A
454 469Right-handed alpha
Helix 25
25
A
488 492Right-handed 310
Helix 26
26
A
537 550Right-handed alpha
Helix 27
27
B
38 41Right-handed 310
Helix 28
28
B
45 54Right-handed alpha
Helix 29
29
B
57 62Right-handed alpha
Helix 30
30
B
64 69Right-handed alpha
Helix 31
31
B
72 77Right-handed alpha
Helix 32
32
B
79 88Right-handed alpha
Helix 33
33
B
89 93Right-handed 310
Helix 34
34
B
112 114Right-handed 310
Helix 35
35
B
119 131Right-handed alpha
Helix 36
36
B
132 136Right-handed 310
Helix 37
37
B
152 154Right-handed 310
Helix 38
38
B
155 166Right-handed alpha
Helix 39
39
B
197 209Right-handed alpha
Helix 40
40
B
215 219Right-handed 310
Helix 41
41
B
238 242Right-handed 310
Helix 42
42
B
284 300Right-handed alpha
Helix 43
43
B
304 308Right-handed 310
Helix 44
44
B
309 329Right-handed alpha
Helix 45
45
B
330 334Right-handed 310
Helix 46
46
B
371 373Right-handed 310
Helix 47
47
B
377 392Right-handed alpha
Helix 48
48
B
413 419Right-handed alpha
Helix 49
49
B
420 426Right-handed alpha
Helix 50
50
B
432 437Right-handed alpha
Helix 51
51
B
442 446Right-handed 310
Helix 52
52
B
454 468Right-handed alpha
Helix 53
53
B
488 492Right-handed 310
Helix 54
54
B
537 550Right-handed alpha
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There are 14 sheets in PDB entry 3B0H. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 30first strand
Strand 2
A
33 36anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
95 97first strand
Strand 2
A
106 109anti-parallel
Strand 3
A
146 151anti-parallel
Strand 4
A
137 140anti-parallel
Strand 5
A
375 376anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
116 118first strand
Strand 2
A
395 398anti-parallel
Strand 3
A
404 410anti-parallel
Strand 4
A
364 369anti-parallel
Strand 5
A
355 358anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
227 229first strand
Strand 2
A
244 251parallel
Strand 3
A
254 261anti-parallel
Strand 4
A
274 281anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
264 265first strand
Strand 2
A
270 271anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
438 440first strand
Strand 2
A
477 480parallel
Strand 3
A
494 502parallel
Strand 4
A
507 515anti-parallel
Strand 5
A
527 534anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
27 30first strand
Strand 2
B
33 36anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
95 97first strand
Strand 2
B
106 109anti-parallel
Strand 3
B
146 151anti-parallel
Strand 4
B
137 140anti-parallel
Strand 5
B
375 376anti-parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
116 118first strand
Strand 2
B
395 398anti-parallel
Strand 3
B
404 410anti-parallel
Strand 4
B
364 369anti-parallel
Strand 5
B
355 358anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
227 229first strand
Strand 2
B
244 251parallel
Strand 3
B
254 261anti-parallel
Strand 4
B
274 281anti-parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
227 229first strand
Strand 2
B
244 251parallel
Strand 3
B
341 342anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
264 265first strand
Strand 2
B
270 271anti-parallel
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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
438 440first strand
Strand 2
B
477 480parallel
Strand 3
B
494 502parallel
Strand 4
B
507 515anti-parallel
Strand 5
B
527 534anti-parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
469 470first strand
Strand 2
B
553 554anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il