Analysis of interatomic Contacts of Structural Units in PDB entry:
3B0X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3B0X entry

There is 1 chain in PDB entry 3B0X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1VAL 575
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 3B0X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 20Right-handed alpha
Helix 2
2
A
23 40Right-handed alpha
Helix 3
3
A
43 49Right-handed alpha
Helix 4
4
A
51 57Right-handed alpha
Helix 5
5
A
62 76Right-handed alpha
Helix 6
6
A
78 88Right-handed alpha
Helix 7
7
A
89 97Right-handed alpha
Helix 8
8
A
102 112Right-handed alpha
Helix 9
9
A
117 128Right-handed alpha
Helix 10
10
A
129 133Right-handed 310
Helix 11
11
A
137 155Right-handed alpha
Helix 12
12
A
160 176Right-handed alpha
Helix 13
13
A
186 191Right-handed alpha
Helix 14
14
A
207 217Right-handed alpha
Helix 15
15
A
248 250Right-handed 310
Helix 16
16
A
251 261Right-handed alpha
Helix 17
17
A
262 276Right-handed alpha
Helix 18
18
A
296 304Right-handed alpha
Helix 19
19
A
310 314Right-handed 310
Helix 20
20
A
318 325Right-handed alpha
Helix 21
21
A
333 337Right-handed 310
Helix 22
22
A
353 364Right-handed alpha
Helix 23
23
A
385 404Right-handed alpha
Helix 24
24
A
425 430Right-handed alpha
Helix 25
25
A
446 458Right-handed alpha
Helix 26
26
A
483 495Right-handed alpha
Helix 27
27
A
510 520Right-handed alpha
Helix 28
28
A
532 537Right-handed 310
Helix 29
29
A
538 549Right-handed alpha
Helix 30
30
A
556 560Right-handed 310
Helix 31
31
A
561 571Right-handed alpha
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There are 4 sheets in PDB entry 3B0X. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 159first strand
Strand 2
A
195 196anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
182 185first strand
Strand 2
A
199 204anti-parallel
Strand 3
A
241 247parallel
Strand 4
A
231 236anti-parallel
Strand 5
A
221 227anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
279 281first strand
Strand 2
A
284 287anti-parallel
Strand 3
A
290 293anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
339 343first strand
Strand 2
A
368 374parallel
Strand 3
A
407 415parallel
Strand 4
A
434 438parallel
Strand 5
A
465 466parallel
Strand 6
A
497 501parallel
Strand 7
A
524 527parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il