Analysis of interatomic Contacts of Structural Units in PDB entry:
3B6Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3B6Q entry

There is 1 chain in PDB entry 3B6Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 393CYS 773
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 3B6Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
411 415Right-handed 310
Helix 2
2
A
416 419Right-handed 310
Helix 3
3
A
423 437Right-handed alpha
Helix 4
4
A
461 469Right-handed alpha
Helix 5
5
A
482 487Right-handed alpha
Helix 6
6
A
635 641Right-handed alpha
Helix 7
7
A
653 662Right-handed alpha
Helix 8
8
A
664 677Right-handed alpha
Helix 9
9
A
685 696Right-handed alpha
Helix 10
10
A
706 714Right-handed alpha
Helix 11
11
A
742 756Right-handed alpha
Helix 12
12
A
757 767Right-handed alpha
Helix 13
13
A
768 771Right-handed 310
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There are 5 sheets in PDB entry 3B6Q. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
440 444first strand
Strand 2
A
395 399parallel
Strand 3
A
474 475parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
407 408first strand
Strand 2
A
421 422anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
489 491first strand
Strand 2
A
735 737anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
496 498first strand
Strand 2
A
730 732anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
646 649first strand
Strand 2
A
700 705parallel
Strand 3
A
500 505anti-parallel
Strand 4
A
720 723anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il