Analysis of interatomic Contacts of Structural Units in PDB entry:
3B6Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3B6Z entry

There is 1 chain in PDB entry 3B6Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 5GLU 361
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 3B6Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
49 54Right-handed alpha
Helix 2
2
A
55 60Right-handed 310
Helix 3
3
A
126 132Right-handed alpha
Helix 4
4
A
133 148Right-handed alpha
Helix 5
5
A
175 188Right-handed alpha
Helix 6
6
A
197 199Right-handed 310
Helix 7
7
A
200 207Right-handed alpha
Helix 8
8
A
219 228Right-handed alpha
Helix 9
9
A
241 252Right-handed alpha
Helix 10
10
A
281 287Right-handed 310
Helix 11
11
A
301 321Right-handed alpha
Helix 12
12
A
335 348Right-handed alpha
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There are 4 sheets in PDB entry 3B6Z. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
12 17first strand
Strand 2
A
23 29anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
110 112first strand
Strand 2
A
39 47anti-parallel
Strand 3
A
69 77anti-parallel
Strand 4
A
89 93anti-parallel
Strand 5
A
118 120anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
110 112first strand
Strand 2
A
39 47anti-parallel
Strand 3
A
355 360anti-parallel
Strand 4
A
329 334parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
211 214first strand
Strand 2
A
191 196parallel
Strand 3
A
167 171parallel
Strand 4
A
234 237parallel
Strand 5
A
257 261parallel
Strand 6
A
275 279parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il