Analysis of interatomic Contacts of Structural Units in PDB entry:
3B7O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3B7O entry

There is 1 chain in PDB entry 3B7O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 246ARG 528
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 8 helices in PDB entry 3B7O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
246 259Right-handed alpha
Helix 2
2
A
260 263Right-handed 310
Helix 3
3
A
266 277Right-handed 310
Helix 4
4
A
337 348Right-handed alpha
Helix 5
5
A
432 448Right-handed alpha
Helix 6
6
A
463 483Right-handed alpha
Helix 7
7
A
489 499Right-handed alpha
Helix 8
8
A
507 528Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 3B7O. Click on sheet of interest to get list of strands forming it: A, B,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
289 291first strand
Strand 2
A
304 310anti-parallel
Strand 3
A
327 331anti-parallel
Strand 4
A
455 459parallel
Strand 5
A
352 355parallel
Strand 6
A
408 420parallel
Strand 7
A
396 405anti-parallel
Strand 8
A
383 392anti-parallel
Strand 9
A
377 380anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
360 361first strand
Strand 2
A
364 365anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il