Analysis of interatomic Contacts of Structural Units in PDB entry:
3B83

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3B83 entry

There are 8 chains in PDB entry 3B83 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 0	HIS 94
B	LEU 1	LEU 92
C	MET 0	HIS 98
D	LEU 1	SER 91
E	MET 0	HIS 98
F	LEU 1	LEU 92
G	MET 0	HIS 98
H	MET 0	GLU 93

There are no helices in PDB entry 3B83

There are 18 sheets in PDB entry 3B83. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	5	10	first strand
Strand 2	A	17	22	anti-parallel
Strand 3	A	53	58	anti-parallel
Strand 4	E	53	58	anti-parallel
Strand 5	E	17	22	anti-parallel
Strand 6	E	5	10	anti-parallel

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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	45	49	first strand
Strand 2	A	30	37	anti-parallel
Strand 3	A	66	75	anti-parallel
Strand 4	A	78	79	anti-parallel

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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	45	49	first strand
Strand 2	A	30	37	anti-parallel
Strand 3	A	66	75	anti-parallel
Strand 4	A	83	88	anti-parallel

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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	5	10	first strand
Strand 2	B	17	22	anti-parallel
Strand 3	B	53	58	anti-parallel
Strand 4	G	53	58	anti-parallel
Strand 5	G	17	22	anti-parallel
Strand 6	G	5	10	anti-parallel

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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	45	49	first strand
Strand 2	B	30	37	anti-parallel
Strand 3	B	66	75	anti-parallel
Strand 4	B	78	79	anti-parallel

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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	45	49	first strand
Strand 2	B	30	37	anti-parallel
Strand 3	B	66	75	anti-parallel
Strand 4	B	83	88	anti-parallel

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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	5	10	first strand
Strand 2	C	17	22	anti-parallel
Strand 3	C	53	58	anti-parallel
Strand 4	F	53	58	anti-parallel
Strand 5	F	17	22	anti-parallel
Strand 6	F	5	10	anti-parallel

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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	45	49	first strand
Strand 2	C	30	37	anti-parallel
Strand 3	C	66	75	anti-parallel
Strand 4	C	78	79	anti-parallel

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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	45	49	first strand
Strand 2	C	30	37	anti-parallel
Strand 3	C	66	75	anti-parallel
Strand 4	C	83	88	anti-parallel

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There are 6 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	5	10	first strand
Strand 2	D	17	22	anti-parallel
Strand 3	D	53	58	anti-parallel
Strand 4	H	53	58	anti-parallel
Strand 5	H	17	22	anti-parallel
Strand 6	H	5	10	anti-parallel

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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	45	49	first strand
Strand 2	D	30	37	anti-parallel
Strand 3	D	66	75	anti-parallel
Strand 4	D	78	79	anti-parallel

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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	45	49	first strand
Strand 2	D	30	37	anti-parallel
Strand 3	D	66	75	anti-parallel
Strand 4	D	83	88	anti-parallel

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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	45	49	first strand
Strand 2	E	30	37	anti-parallel
Strand 3	E	66	75	anti-parallel
Strand 4	E	78	79	anti-parallel

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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	45	49	first strand
Strand 2	E	30	37	anti-parallel
Strand 3	E	66	75	anti-parallel
Strand 4	E	83	88	anti-parallel

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There are 4 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	45	49	first strand
Strand 2	F	31	37	anti-parallel
Strand 3	F	66	73	anti-parallel
Strand 4	F	83	88	anti-parallel

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There are 4 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	45	49	first strand
Strand 2	G	30	37	anti-parallel
Strand 3	G	66	75	anti-parallel
Strand 4	G	78	79	anti-parallel

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There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	45	49	first strand
Strand 2	G	30	37	anti-parallel
Strand 3	G	66	75	anti-parallel
Strand 4	G	83	88	anti-parallel

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There are 4 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	45	49	first strand
Strand 2	H	30	37	anti-parallel
Strand 3	H	66	74	anti-parallel
Strand 4	H	83	88	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3B83

Analysis of interatomic Contacts of Structural Units in PDB entry:
3B83