Analysis of interatomic Contacts of Structural Units in PDB entry:
3B9P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3B9P entry

There is 1 chain in PDB entry 3B9P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 464SER 750
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 3B9P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
464 471Right-handed alpha
Helix 2
2
A
481 485Right-handed 310
Helix 3
3
A
488 499Right-handed alpha
Helix 4
4
A
499 505Right-handed alpha
Helix 5
5
A
506 509Right-handed 310
Helix 6
6
A
510 514Right-handed 310
Helix 7
7
A
528 540Right-handed alpha
Helix 8
8
A
559 574Right-handed alpha
Helix 9
9
A
583 587Right-handed 310
Helix 10
10
A
599 613Right-handed alpha
Helix 11
11
A
630 634Right-handed 310
Helix 12
12
A
635 642Right-handed alpha
Helix 13
13
A
652 665Right-handed alpha
Helix 14
14
A
666 668Right-handed 310
Helix 15
15
A
672 683Right-handed alpha
Helix 16
16
A
687 699Right-handed alpha
Helix 17
17
A
700 705Right-handed alpha
Helix 18
18
A
723 731Right-handed alpha
Helix 19
19
A
739 750Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3B9P.

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
543 548first strand
Strand 2
A
577 582parallel
Strand 3
A
622 628parallel
Strand 4
A
518 522parallel
Strand 5
A
644 647parallel
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