Analysis of interatomic Contacts of Structural Units in PDB entry:
3BCC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3BCC entry

There are 10 chains in PDB entry 3BCC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 4ARG 445
B
 PRO 18LEU 439
C
 ALA 2TYR 380
D
 SER 1LYS 241
E
 SER 1GLY 196
F
 SER 10LYS 109
G
 ARG 2ASN 79
H
 LEU 13LYS 78
I
 UNK 105UNK 315
J
 THR 4LYS 62
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 80 helices in PDB entry 3BCC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 9Right-handed alpha
Helix 2
2
A
55 60Right-handed alpha
Helix 3
3
A
72 82Right-handed alpha
Helix 4
4
A
106 117Right-handed alpha
Helix 5
5
A
124 143Right-handed alpha
Helix 6
6
A
145 157Right-handed alpha
Helix 7
7
A
171 174Right-handed alpha
Helix 8
8
A
179 189Right-handed alpha
Helix 9
9
A
192 194Right-handed 310
Helix 10
10
A
205 215Right-handed alpha
Helix 11
11
A
265 277Right-handed 310
Helix 12
12
A
293 300Right-handed alpha
Helix 13
13
A
331 347Right-handed alpha
Helix 14
14
A
351 367Right-handed alpha
Helix 15
15
A
373 386Right-handed alpha
Helix 16
16
A
392 400Right-handed alpha
Helix 17
17
A
404 415Right-handed alpha
Helix 18
18
A
434 438Right-handed alpha
Helix 19
19
B
65 74Right-handed alpha
Helix 20
20
B
82 92Right-handed alpha
Helix 21
21
B
114 128Right-handed 310
Helix 22
22
B
134 138Right-handed alpha
Helix 23
23
B
141 153Right-handed 310
Helix 24
24
B
155 167Right-handed alpha
Helix 25
25
B
180 182Right-handed 310
Helix 26
26
B
188 196Right-handed alpha
Helix 27
27
B
201 203Right-handed 310
Helix 28
28
B
213 217Right-handed alpha
Helix 29
29
B
269 278Right-handed alpha
Helix 30
30
B
281 285Right-handed alpha
Helix 31
31
B
333 345Right-handed alpha
Helix 32
32
B
354 372Right-handed alpha
Helix 33
33
B
375 388Right-handed alpha
Helix 34
34
B
397 404Right-handed alpha
Helix 35
35
B
411 419Right-handed alpha
Helix 36
36
C
10 17Right-handed alpha
Helix 37
37
C
30 32Right-handed 310
Helix 38
38
C
36 52Right-handed alpha
Helix 39
39
C
60 72Right-handed alpha
Helix 40
40
C
77 105Right-handed alpha
Helix 41
41
C
107 109Right-handed 310
Helix 42
42
C
111 132Right-handed alpha
Helix 43
43
C
138 152Right-handed alpha
Helix 44
44
C
158 165Right-handed alpha
Helix 45
45
C
173 203Right-handed alpha
Helix 46
46
C
223 246Right-handed alpha
Helix 47
47
C
248 250Right-handed 310
Helix 48
48
C
254 257Right-handed 310
Helix 49
49
C
273 282Right-handed 310
Helix 50
50
C
288 299Right-handed alpha
Helix 51
51
C
302 307Right-handed alpha
Helix 52
52
C
320 340Right-handed alpha
Helix 53
53
C
350 364Right-handed alpha
Helix 54
54
C
366 378Right-handed alpha
Helix 55
55
D
23 36Right-handed alpha
Helix 56
56
D
48 51Right-handed alpha
Helix 57
57
D
58 66Right-handed alpha
Helix 58
58
D
98 102Right-handed alpha
Helix 59
59
D
116 118Right-handed 310
Helix 60
60
D
123 131Right-handed alpha
Helix 61
61
D
179 194Right-handed alpha
Helix 62
62
D
198 232Right-handed alpha
Helix 63
63
E
29 60Right-handed alpha
Helix 64
64
E
78 80Right-handed 310
Helix 65
65
E
103 110Right-handed alpha
Helix 66
66
E
114 116Right-handed 310
Helix 67
67
E
123 125Right-handed 310
Helix 68
68
F
13 24Right-handed alpha
Helix 69
69
F
33 35Right-handed 310
Helix 70
70
F
41 49Right-handed alpha
Helix 71
71
F
52 71Right-handed alpha
Helix 72
72
F
83 85Right-handed 310
Helix 73
73
F
91 107Right-handed alpha
Helix 74
74
G
33 68Right-handed alpha
Helix 75
75
H
16 26Right-handed alpha
Helix 76
76
H
28 44Right-handed alpha
Helix 77
77
H
55 76Right-handed alpha
Helix 78
78
J
5 13Right-handed alpha
Helix 79
79
J
17 47Right-handed alpha
Helix 80
80
J
52 55Right-handed alpha
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There are 8 sheets in PDB entry 3BCC. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 18first strand
Strand 2
A
24 29anti-parallel
Strand 3
A
195 201parallel
Strand 4
A
35 41anti-parallel
Strand 5
A
95 100anti-parallel
Strand 6
A
85 90anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
240 244first strand
Strand 2
A
421 426parallel
Strand 3
A
250 259anti-parallel
Strand 4
A
318 327anti-parallel
Strand 5
A
306 313anti-parallel
Strand 6
A
279 281anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
204 208first strand
Strand 2
B
46 51anti-parallel
Strand 3
B
104 110anti-parallel
Strand 4
B
95 101anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
243 247first strand
Strand 2
B
422 428parallel
Strand 3
B
254 259anti-parallel
Strand 4
B
319 325anti-parallel
Strand 5
B
310 316anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
69 72first strand
Strand 2
D
81 84anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
74 77first strand
Strand 2
E
192 195anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
86 91first strand
Strand 2
E
94 100anti-parallel
Strand 3
E
132 136anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
154 158first strand
Strand 2
E
163 166anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il