Analysis of interatomic Contacts of Structural Units in PDB entry:
3BCE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3BCE entry

There are 3 chains in PDB entry 3BCE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 678ASP 966
B
 THR 678MET 968
C
 THR 678ASP 965
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 3BCE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
689 691Right-handed 310
Helix 2
2
A
735 749Right-handed alpha
Helix 3
3
A
778 786Right-handed alpha
Helix 4
4
A
791 812Right-handed alpha
Helix 5
5
A
820 822Right-handed 310
Helix 6
6
A
858 862Right-handed 310
Helix 7
7
A
863 870Right-handed alpha
Helix 8
8
A
873 890Right-handed alpha
Helix 9
9
A
900 902Right-handed 310
Helix 10
10
A
903 910Right-handed alpha
Helix 11
11
A
921 932Right-handed alpha
Helix 12
12
A
935 939Right-handed 310
Helix 13
13
A
941 954Right-handed alpha
Helix 14
14
A
955 959Right-handed 310
Helix 15
15
B
689 691Right-handed 310
Helix 16
16
B
735 749Right-handed alpha
Helix 17
17
B
778 786Right-handed alpha
Helix 18
18
B
791 812Right-handed alpha
Helix 19
19
B
820 822Right-handed 310
Helix 20
20
B
858 862Right-handed 310
Helix 21
21
B
863 870Right-handed alpha
Helix 22
22
B
873 890Right-handed alpha
Helix 23
23
B
900 902Right-handed 310
Helix 24
24
B
903 910Right-handed alpha
Helix 25
25
B
921 931Right-handed alpha
Helix 26
26
B
935 939Right-handed 310
Helix 27
27
B
941 954Right-handed alpha
Helix 28
28
B
955 959Right-handed 310
Helix 29
29
C
689 691Right-handed 310
Helix 30
30
C
735 749Right-handed alpha
Helix 31
31
C
778 786Right-handed alpha
Helix 32
32
C
791 812Right-handed alpha
Helix 33
33
C
820 822Right-handed 310
Helix 34
34
C
858 862Right-handed 310
Helix 35
35
C
863 870Right-handed alpha
Helix 36
36
C
873 890Right-handed alpha
Helix 37
37
C
900 902Right-handed 310
Helix 38
38
C
903 910Right-handed alpha
Helix 39
39
C
921 931Right-handed alpha
Helix 40
40
C
935 939Right-handed 310
Helix 41
41
C
941 954Right-handed alpha
Helix 42
42
C
955 960Right-handed alpha
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There are 11 sheets in PDB entry 3BCE. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
687 688first strand
Strand 2
A
758 762parallel
Strand 3
A
768 772anti-parallel
Strand 4
A
721 727anti-parallel
Strand 5
A
706 712anti-parallel
Strand 6
A
693 700anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
814 815first strand
Strand 2
A
841 842anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
824 828first strand
Strand 2
A
831 834anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
850 851first strand
Strand 2
A
871 872anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
687 688first strand
Strand 2
B
758 762parallel
Strand 3
B
768 772anti-parallel
Strand 4
B
721 727anti-parallel
Strand 5
B
705 712anti-parallel
Strand 6
B
693 702anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
814 815first strand
Strand 2
B
841 842anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
824 828first strand
Strand 2
B
831 834anti-parallel
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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
687 688first strand
Strand 2
C
758 762parallel
Strand 3
C
768 772anti-parallel
Strand 4
C
721 727anti-parallel
Strand 5
C
705 712anti-parallel
Strand 6
C
693 702anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
814 815first strand
Strand 2
C
841 842anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
824 828first strand
Strand 2
C
831 834anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
850 851first strand
Strand 2
C
871 872anti-parallel
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