Analysis of interatomic Contacts of Structural Units in PDB entry:
3BE8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3BE8 entry

There are 2 chains in PDB entry 3BE8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP -8LEU 597
B
 ALA -2LEU 597
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 3BE8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
2
A
83 87Right-handed 310
Helix 2
3
A
118 123Right-handed alpha
Helix 3
4
A
127 135Right-handed alpha
Helix 4
5
A
135 141Right-handed alpha
Helix 5
6
A
181 185Right-handed 310
Helix 6
7
A
187 195Right-handed alpha
Helix 7
8
A
205 211Right-handed alpha
Helix 8
9
A
221 238Right-handed alpha
Helix 9
10
A
239 241Right-handed 310
Helix 10
11
A
254 264Right-handed alpha
Helix 11
12
A
265 270Right-handed 310
Helix 12
13
A
292 304Right-handed alpha
Helix 13
14
A
310 320Right-handed alpha
Helix 14
15
A
322 328Right-handed alpha
Helix 15
16
A
352 359Right-handed alpha
Helix 16
17
A
360 365Right-handed 310
Helix 17
18
A
376 381Right-handed 310
Helix 18
19
A
391 407Right-handed alpha
Helix 19
20
A
412 424Right-handed alpha
Helix 20
21
A
432 449Right-handed alpha
Helix 21
22
A
449 462Right-handed alpha
Helix 22
23
A
492 497Right-handed alpha
Helix 23
24
A
498 502Right-handed 310
Helix 24
25
A
513 534Right-handed alpha
Helix 25
26
A
583 592Right-handed alpha
Helix 26
27
A
593 597Right-handed 310
Helix 27
28
B
83 87Right-handed 310
Helix 28
29
B
118 123Right-handed alpha
Helix 29
30
B
135 140Right-handed alpha
Helix 30
31
B
181 185Right-handed 310
Helix 31
32
B
187 195Right-handed alpha
Helix 32
33
B
205 211Right-handed alpha
Helix 33
34
B
221 238Right-handed alpha
Helix 34
35
B
239 241Right-handed 310
Helix 35
36
B
254 265Right-handed alpha
Helix 36
37
B
266 270Right-handed 310
Helix 37
38
B
292 304Right-handed alpha
Helix 38
39
B
310 320Right-handed alpha
Helix 39
40
B
322 328Right-handed alpha
Helix 40
41
B
352 360Right-handed alpha
Helix 41
42
B
376 381Right-handed 310
Helix 42
43
B
391 407Right-handed alpha
Helix 43
44
B
412 424Right-handed alpha
Helix 44
45
B
432 449Right-handed alpha
Helix 45
46
B
449 462Right-handed alpha
Helix 46
47
B
492 497Right-handed alpha
Helix 47
48
B
498 502Right-handed 310
Helix 48
49
B
513 534Right-handed alpha
Helix 49
50
B
583 592Right-handed alpha
Helix 50
51
B
593 597Right-handed 310
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There are 5 sheets in PDB entry 3BE8. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 50first strand
Strand 2
A
53 56anti-parallel
Strand 3
A
100 102parallel
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There are 11 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 60first strand
Strand 2
A
70 77anti-parallel
Strand 3
A
148 154anti-parallel
Strand 4
A
197 201anti-parallel
Strand 5
A
166 172parallel
Strand 6
A
243 253parallel
Strand 7
A
275 279parallel
Strand 8
A
366 372parallel
Strand 9
A
467 472parallel
Strand 10
A
568 572parallel
Strand 11
A
577 580anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
506 507first strand
Strand 2
A
510 511anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 50first strand
Strand 2
B
53 56anti-parallel
Strand 3
B
100 102parallel
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There are 11 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 60first strand
Strand 2
B
70 77anti-parallel
Strand 3
B
148 154anti-parallel
Strand 4
B
197 201anti-parallel
Strand 5
B
166 172parallel
Strand 6
B
243 253parallel
Strand 7
B
275 279parallel
Strand 8
B
366 372parallel
Strand 9
B
467 472parallel
Strand 10
B
568 572parallel
Strand 11
B
577 580anti-parallel
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