Analysis of interatomic Contacts of Structural Units in PDB entry:
3BGK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3BGK entry

There is 1 chain in PDB entry 3BGK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1GLU 277
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 3BGK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 12Right-handed alpha
Helix 2
2
A
36 50Right-handed alpha
Helix 3
3
A
60 62Right-handed 310
Helix 4
4
A
63 71Right-handed alpha
Helix 5
5
A
81 92Right-handed alpha
Helix 6
6
A
104 118Right-handed alpha
Helix 7
7
A
128 137Right-handed alpha
Helix 8
8
A
154 159Right-handed alpha
Helix 9
9
A
168 177Right-handed alpha
Helix 10
10
A
207 211Right-handed 310
Helix 11
11
A
214 230Right-handed alpha
Helix 12
12
A
233 254Right-handed alpha
Helix 13
13
A
260 277Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3BGK.

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 3first strand
Strand 2
A
199 203parallel
Strand 3
A
193 196anti-parallel
Strand 4
A
184 187anti-parallel
Strand 5
A
147 150parallel
Strand 6
A
123 127parallel
Strand 7
A
94 97parallel
Strand 8
A
26 30parallel
Strand 9
A
54 59parallel
Strand 10
A
75 78parallel
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