Analysis of interatomic Contacts of Structural Units in PDB entry:
3BGW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3BGW entry

There are 6 chains in PDB entry 3BGW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 12GLU 436
B
 ASN 12GLU 436
C
 ASN 12GLU 436
D
 ASN 12GLU 436
E
 ASN 12GLU 436
F
 ASN 12GLU 436
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are135 helices in PDB entry 3BGW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 26Right-handed alpha
Helix 2
2
A
28 33Right-handed alpha
Helix 3
3
A
36 40Right-handed 310
Helix 4
4
A
43 58Right-handed alpha
Helix 5
5
A
63 71Right-handed alpha
Helix 6
6
A
75 79Right-handed 310
Helix 7
7
A
80 91Right-handed alpha
Helix 8
8
A
96 125Right-handed alpha
Helix 9
9
A
134 147Right-handed alpha
Helix 10
10
A
157 170Right-handed alpha
Helix 11
11
A
182 190Right-handed alpha
Helix 12
12
A
207 222Right-handed alpha
Helix 13
13
A
236 247Right-handed alpha
Helix 14
14
A
250 257Right-handed alpha
Helix 15
15
A
258 261Right-handed 310
Helix 16
16
A
265 278Right-handed alpha
Helix 17
17
A
290 305Right-handed alpha
Helix 18
18
A
328 348Right-handed alpha
Helix 19
19
A
358 364Right-handed 310
Helix 20
20
A
370 374Right-handed 310
Helix 21
21
A
378 384Right-handed alpha
Helix 22
22
A
392 396Right-handed 310
Helix 23
23
B
13 26Right-handed alpha
Helix 24
24
B
28 33Right-handed alpha
Helix 25
25
B
36 40Right-handed 310
Helix 26
26
B
43 58Right-handed alpha
Helix 27
27
B
63 71Right-handed alpha
Helix 28
28
B
74 79Right-handed 310
Helix 29
29
B
80 91Right-handed alpha
Helix 30
30
B
96 125Right-handed alpha
Helix 31
31
B
134 147Right-handed alpha
Helix 32
32
B
157 170Right-handed alpha
Helix 33
33
B
182 190Right-handed alpha
Helix 34
34
B
207 222Right-handed alpha
Helix 35
35
B
234 247Right-handed alpha
Helix 36
36
B
250 257Right-handed alpha
Helix 37
37
B
258 261Right-handed 310
Helix 38
38
B
265 278Right-handed alpha
Helix 39
39
B
290 305Right-handed alpha
Helix 40
40
B
328 348Right-handed alpha
Helix 41
41
B
358 364Right-handed 310
Helix 42
42
B
370 374Right-handed 310
Helix 43
43
B
378 384Right-handed alpha
Helix 44
44
B
394 396Right-handed 310
Helix 45
45
C
13 26Right-handed alpha
Helix 46
46
C
28 33Right-handed alpha
Helix 47
47
C
36 40Right-handed 310
Helix 48
48
C
43 58Right-handed alpha
Helix 49
49
C
63 71Right-handed alpha
Helix 50
50
C
75 79Right-handed 310
Helix 51
51
C
80 91Right-handed alpha
Helix 52
52
C
96 125Right-handed alpha
Helix 53
53
C
134 148Right-handed alpha
Helix 54
54
C
159 170Right-handed alpha
Helix 55
55
C
182 190Right-handed alpha
Helix 56
56
C
209 222Right-handed alpha
Helix 57
57
C
234 247Right-handed alpha
Helix 58
58
C
250 256Right-handed alpha
Helix 59
59
C
257 261Right-handed 310
Helix 60
60
C
265 278Right-handed alpha
Helix 61
61
C
290 305Right-handed alpha
Helix 62
62
C
328 348Right-handed alpha
Helix 63
63
C
358 364Right-handed 310
Helix 64
64
C
370 374Right-handed 310
Helix 65
65
C
378 384Right-handed alpha
Helix 66
66
C
392 396Right-handed 310
Helix 67
67
D
13 26Right-handed alpha
Helix 68
68
D
28 33Right-handed alpha
Helix 69
69
D
36 40Right-handed 310
Helix 70
70
D
43 58Right-handed alpha
Helix 71
71
D
63 71Right-handed alpha
Helix 72
72
D
75 79Right-handed 310
Helix 73
73
D
80 91Right-handed alpha
Helix 74
74
D
96 116Right-handed alpha
Helix 75
75
D
116 125Right-handed alpha
Helix 76
76
D
134 146Right-handed alpha
Helix 77
77
D
158 160Right-handed 310
Helix 78
78
D
161 170Right-handed alpha
Helix 79
79
D
182 190Right-handed alpha
Helix 80
80
D
207 222Right-handed alpha
Helix 81
81
D
234 247Right-handed alpha
Helix 82
82
D
250 256Right-handed alpha
Helix 83
83
D
257 261Right-handed 310
Helix 84
84
D
265 278Right-handed alpha
Helix 85
85
D
290 305Right-handed alpha
Helix 86
86
D
328 348Right-handed alpha
Helix 87
87
D
358 364Right-handed 310
Helix 88
88
D
370 374Right-handed 310
Helix 89
89
D
378 384Right-handed alpha
Helix 90
90
D
392 396Right-handed 310
Helix 91
91
E
13 26Right-handed alpha
Helix 92
92
E
28 33Right-handed alpha
Helix 93
93
E
36 40Right-handed 310
Helix 94
94
E
43 58Right-handed alpha
Helix 95
95
E
63 71Right-handed alpha
Helix 96
96
E
75 79Right-handed 310
Helix 97
97
E
80 91Right-handed alpha
Helix 98
98
E
96 116Right-handed alpha
Helix 99
99
E
116 125Right-handed alpha
Helix 100
100
E
134 148Right-handed alpha
Helix 101
101
E
159 171Right-handed alpha
Helix 102
102
E
182 190Right-handed alpha
Helix 103
103
E
207 222Right-handed alpha
Helix 104
104
E
234 247Right-handed alpha
Helix 105
105
E
250 256Right-handed alpha
Helix 106
106
E
257 261Right-handed 310
Helix 107
107
E
265 278Right-handed alpha
Helix 108
108
E
290 305Right-handed alpha
Helix 109
109
E
328 348Right-handed alpha
Helix 110
110
E
358 364Right-handed 310
Helix 111
111
E
370 374Right-handed 310
Helix 112
112
E
378 384Right-handed alpha
Helix 113
113
E
392 397Right-handed alpha
Helix 114
114
F
13 26Right-handed alpha
Helix 115
115
F
28 33Right-handed alpha
Helix 116
116
F
36 40Right-handed 310
Helix 117
117
F
43 58Right-handed alpha
Helix 118
118
F
63 71Right-handed alpha
Helix 119
119
F
75 79Right-handed 310
Helix 120
120
F
80 91Right-handed alpha
Helix 121
121
F
96 125Right-handed alpha
Helix 122
122
F
134 147Right-handed alpha
Helix 123
123
F
160 164Right-handed 310
Helix 124
124
F
182 190Right-handed alpha
Helix 125
125
F
207 222Right-handed alpha
Helix 126
126
F
234 247Right-handed alpha
Helix 127
127
F
250 256Right-handed alpha
Helix 128
128
F
257 261Right-handed 310
Helix 129
129
F
265 278Right-handed alpha
Helix 130
130
F
290 305Right-handed alpha
Helix 131
131
F
328 348Right-handed alpha
Helix 132
132
F
358 364Right-handed 310
Helix 133
133
F
370 374Right-handed 310
Helix 134
134
F
378 384Right-handed alpha
Helix 135
135
F
392 396Right-handed 310
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There are 6 sheets in PDB entry 3BGW. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
281 284first strand
Strand 2
A
225 229parallel
Strand 3
A
310 315parallel
Strand 4
A
350 356parallel
Strand 5
A
197 202parallel
Strand 6
A
386 389parallel
Strand 7
A
405 413anti-parallel
Strand 8
A
419 425anti-parallel
Strand 9
A
432 433anti-parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
281 284first strand
Strand 2
B
225 229parallel
Strand 3
B
310 314parallel
Strand 4
B
350 356parallel
Strand 5
B
197 202parallel
Strand 6
B
386 392parallel
Strand 7
B
405 410anti-parallel
Strand 8
B
419 425anti-parallel
Strand 9
B
432 433anti-parallel
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There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
281 284first strand
Strand 2
C
225 229parallel
Strand 3
C
310 315parallel
Strand 4
C
350 356parallel
Strand 5
C
197 202parallel
Strand 6
C
386 389parallel
Strand 7
C
405 410anti-parallel
Strand 8
C
419 425anti-parallel
Strand 9
C
432 433anti-parallel
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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
281 284first strand
Strand 2
D
225 229parallel
Strand 3
D
310 315parallel
Strand 4
D
350 356parallel
Strand 5
D
197 202parallel
Strand 6
D
386 390parallel
Strand 7
D
405 410anti-parallel
Strand 8
D
419 425anti-parallel
Strand 9
D
432 433anti-parallel
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There are 9 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
281 284first strand
Strand 2
E
225 229parallel
Strand 3
E
310 315parallel
Strand 4
E
350 356parallel
Strand 5
E
197 202parallel
Strand 6
E
386 389parallel
Strand 7
E
405 410anti-parallel
Strand 8
E
419 425anti-parallel
Strand 9
E
432 433anti-parallel
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There are 9 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
281 284first strand
Strand 2
F
225 229parallel
Strand 3
F
310 315parallel
Strand 4
F
350 356parallel
Strand 5
F
197 202parallel
Strand 6
F
386 389parallel
Strand 7
F
405 410anti-parallel
Strand 8
F
419 425anti-parallel
Strand 9
F
432 433anti-parallel
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