Analysis of interatomic Contacts of Structural Units in PDB entry:
3BHH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3BHH entry

There are 4 chains in PDB entry 3BHH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 9LYS 301
B
 MET 10LYS 301
C
 MET 10LEU 300
D
 MET 10LYS 301
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 54 helices in PDB entry 3BHH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 13Right-handed alpha
Helix 2
2
A
51 68Right-handed alpha
Helix 3
3
A
98 103Right-handed alpha
Helix 4
4
A
109 130Right-handed alpha
Helix 5
5
A
138 140Right-handed 310
Helix 6
6
A
177 181Right-handed 310
Helix 7
7
A
182 187Right-handed alpha
Helix 8
8
A
193 210Right-handed alpha
Helix 9
9
A
218 229Right-handed alpha
Helix 10
10
A
242 253Right-handed alpha
Helix 11
11
A
262 267Right-handed alpha
Helix 12
12
A
269 274Right-handed alpha
Helix 13
13
A
274 279Right-handed alpha
Helix 14
14
A
284 299Right-handed alpha
Helix 15
15
B
51 68Right-handed alpha
Helix 16
16
B
97 103Right-handed alpha
Helix 17
17
B
109 130Right-handed alpha
Helix 18
18
B
138 140Right-handed 310
Helix 19
19
B
177 181Right-handed 310
Helix 20
20
B
182 187Right-handed alpha
Helix 21
21
B
193 210Right-handed alpha
Helix 22
22
B
218 229Right-handed alpha
Helix 23
23
B
242 253Right-handed alpha
Helix 24
24
B
262 267Right-handed alpha
Helix 25
25
B
269 274Right-handed alpha
Helix 26
26
B
274 279Right-handed alpha
Helix 27
27
B
284 299Right-handed alpha
Helix 28
28
C
51 68Right-handed alpha
Helix 29
29
C
97 103Right-handed alpha
Helix 30
30
C
109 130Right-handed alpha
Helix 31
31
C
138 140Right-handed 310
Helix 32
32
C
177 181Right-handed 310
Helix 33
33
C
182 187Right-handed alpha
Helix 34
34
C
193 210Right-handed alpha
Helix 35
35
C
218 229Right-handed alpha
Helix 36
36
C
236 240Right-handed 310
Helix 37
37
C
242 253Right-handed alpha
Helix 38
38
C
262 267Right-handed alpha
Helix 39
39
C
269 274Right-handed alpha
Helix 40
40
C
274 279Right-handed alpha
Helix 41
41
C
284 299Right-handed alpha
Helix 42
42
D
51 68Right-handed alpha
Helix 43
43
D
97 103Right-handed alpha
Helix 44
44
D
109 130Right-handed alpha
Helix 45
45
D
138 140Right-handed 310
Helix 46
46
D
177 181Right-handed 310
Helix 47
47
D
182 187Right-handed alpha
Helix 48
48
D
193 210Right-handed alpha
Helix 49
49
D
218 229Right-handed alpha
Helix 50
50
D
242 253Right-handed alpha
Helix 51
51
D
262 267Right-handed alpha
Helix 52
52
D
269 274Right-handed alpha
Helix 53
53
D
274 279Right-handed alpha
Helix 54
54
D
284 299Right-handed alpha
Back to top of page

There are 12 sheets in PDB entry 3BHH. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
14 19first strand
Strand 2
A
27 33anti-parallel
Strand 3
A
39 46anti-parallel
Strand 4
A
85 91anti-parallel
Strand 5
A
76 81anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
96 97first strand
Strand 2
A
142 144anti-parallel
Strand 3
A
153 155anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 133first strand
Strand 2
A
162 163anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
14 21first strand
Strand 2
B
27 33anti-parallel
Strand 3
B
39 46anti-parallel
Strand 4
B
85 91anti-parallel
Strand 5
B
76 81anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
132 133first strand
Strand 2
B
162 163anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
142 144first strand
Strand 2
B
153 155anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
14 19first strand
Strand 2
C
28 33anti-parallel
Strand 3
C
39 46anti-parallel
Strand 4
C
85 91anti-parallel
Strand 5
C
76 81anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
132 133first strand
Strand 2
C
162 163anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
142 144first strand
Strand 2
C
153 155anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
14 19first strand
Strand 2
D
28 33anti-parallel
Strand 3
D
39 46anti-parallel
Strand 4
D
85 91anti-parallel
Strand 5
D
76 81anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
132 133first strand
Strand 2
D
162 163anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
142 144first strand
Strand 2
D
153 155anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il