Analysis of interatomic Contacts of Structural Units in PDB entry:
3BI6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3BI6 entry

There is 1 chain in PDB entry 3BI6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 293LEU 570
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 3BI6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
293 298Right-handed alpha
Helix 2
2
A
337 351Right-handed alpha
Helix 3
3
A
383 395Right-handed alpha
Helix 4
4
A
399 420Right-handed alpha
Helix 5
5
A
428 430Right-handed 310
Helix 6
6
A
479 483Right-handed 310
Helix 7
7
A
484 489Right-handed alpha
Helix 8
8
A
495 511Right-handed alpha
Helix 9
9
A
520 528Right-handed alpha
Helix 10
10
A
539 550Right-handed alpha
Helix 11
11
A
553 557Right-handed 310
Helix 12
12
A
559 566Right-handed alpha
Helix 13
13
A
567 570Right-handed 310
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There are 3 sheets in PDB entry 3BI6. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
299 307first strand
Strand 2
A
312 318anti-parallel
Strand 3
A
324 331anti-parallel
Strand 4
A
371 377anti-parallel
Strand 5
A
362 368anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
422 423first strand
Strand 2
A
468 469anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
432 435first strand
Strand 2
A
458 461anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il