Analysis of interatomic Contacts of Structural Units in PDB entry:
3BJS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3BJS entry

There are 2 chains in PDB entry 3BJS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 37ASP 410
B
 MET 37VAL 416
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 3BJS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
91 102Right-handed alpha
Helix 2
2
A
114 126Right-handed alpha
Helix 3
3
A
133 156Right-handed alpha
Helix 4
4
A
158 163Right-handed alpha
Helix 5
5
A
183 198Right-handed alpha
Helix 6
6
A
209 225Right-handed alpha
Helix 7
7
A
239 253Right-handed alpha
Helix 8
8
A
266 274Right-handed alpha
Helix 9
9
A
290 299Right-handed alpha
Helix 10
10
A
315 329Right-handed alpha
Helix 11
11
A
340 354Right-handed alpha
Helix 12
12
A
399 403Right-handed 310
Helix 13
13
B
91 102Right-handed alpha
Helix 14
14
B
114 126Right-handed alpha
Helix 15
15
B
133 156Right-handed alpha
Helix 16
16
B
158 163Right-handed alpha
Helix 17
17
B
183 197Right-handed alpha
Helix 18
18
B
209 225Right-handed alpha
Helix 19
19
B
239 253Right-handed alpha
Helix 20
20
B
266 274Right-handed alpha
Helix 21
21
B
289 301Right-handed alpha
Helix 22
22
B
314 329Right-handed alpha
Helix 23
23
B
340 354Right-handed alpha
Helix 24
24
B
399 403Right-handed 310
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There are 7 sheets in PDB entry 3BJS. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 50first strand
Strand 2
A
66 76anti-parallel
Strand 3
A
81 86anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
360 363first strand
Strand 2
A
170 175parallel
Strand 3
A
385 386anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
201 205first strand
Strand 2
A
229 233parallel
Strand 3
A
258 259parallel
Strand 4
A
282 284parallel
Strand 5
A
303 306parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
39 50first strand
Strand 2
B
66 76anti-parallel
Strand 3
B
81 86anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 59first strand
Strand 2
B
62 64anti-parallel
Strand 3
B
414 415anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
360 363first strand
Strand 2
B
170 175parallel
Strand 3
B
385 386anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
201 205first strand
Strand 2
B
229 233parallel
Strand 3
B
258 259parallel
Strand 4
B
282 284parallel
Strand 5
B
303 306parallel
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