Analysis of interatomic Contacts of Structural Units in PDB entry:
3BJZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3BJZ entry

There are 4 chains in PDB entry 3BJZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 2GLY 194
B
 GLY -1SER 195
C
 MSE 1SER 195
D
 ASP 2SER 195
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 3BJZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 25Right-handed alpha
Helix 2
2
A
25 42Right-handed alpha
Helix 3
3
A
53 68Right-handed alpha
Helix 4
4
A
99 109Right-handed alpha
Helix 5
5
A
124 137Right-handed alpha
Helix 6
6
A
169 194Right-handed alpha
Helix 7
7
B
0 25Right-handed alpha
Helix 8
8
B
25 42Right-handed alpha
Helix 9
9
B
52 68Right-handed alpha
Helix 10
10
B
96 98Right-handed 310
Helix 11
11
B
99 109Right-handed alpha
Helix 12
12
B
124 137Right-handed alpha
Helix 13
13
B
149 156Right-handed alpha
Helix 14
14
B
169 194Right-handed alpha
Helix 15
15
C
1 25Right-handed alpha
Helix 16
16
C
25 42Right-handed alpha
Helix 17
17
C
54 67Right-handed alpha
Helix 18
18
C
99 109Right-handed alpha
Helix 19
19
C
124 137Right-handed alpha
Helix 20
20
C
149 156Right-handed alpha
Helix 21
21
C
169 194Right-handed alpha
Helix 22
22
D
3 23Right-handed alpha
Helix 23
23
D
25 42Right-handed alpha
Helix 24
24
D
54 68Right-handed alpha
Helix 25
25
D
99 109Right-handed alpha
Helix 26
26
D
124 137Right-handed alpha
Helix 27
27
D
149 154Right-handed alpha
Helix 28
28
D
169 193Right-handed alpha
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There are 4 sheets in PDB entry 3BJZ. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 80first strand
Strand 2
A
46 50parallel
Strand 3
A
114 118parallel
Strand 4
A
140 145parallel
Strand 5
A
161 164parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
78 80first strand
Strand 2
B
46 50parallel
Strand 3
B
114 118parallel
Strand 4
B
140 146parallel
Strand 5
B
161 165parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
78 80first strand
Strand 2
C
46 50parallel
Strand 3
C
114 118parallel
Strand 4
C
140 145parallel
Strand 5
C
161 164parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
78 80first strand
Strand 2
D
46 50parallel
Strand 3
D
114 118parallel
Strand 4
D
140 145parallel
Strand 5
D
161 164parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il