Analysis of interatomic Contacts of Structural Units in PDB entry:
3BK9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3BK9 entry

There are 8 chains in PDB entry 3BK9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LEU 7GLY 283
B
LEU 7ASN 286
C
LEU 7VAL 282
D
LEU 22GLY 283
E
THR 23VAL 282
F
THR 23GLY 283
G
ARG 21VAL 282
H
LEU 22GLY 283
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are145 helices in PDB entry 3BK9. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
23 28Right-handed alpha
Helix 2
2
A
29 34Right-handed alpha
Helix 3
3
A
47 78Right-handed alpha
Helix 4
4
A
80 101Right-handed alpha
Helix 5
5
A
101 106Right-handed alpha
Helix 6
6
A
109 114Right-handed alpha
Helix 7
7
A
115 121Right-handed 310
Helix 8
8
A
124 127Right-handed 310
Helix 9
9
A
128 138Right-handed alpha
Helix 10
10
A
142 150Right-handed 310
Helix 11
11
A
152 164Right-handed alpha
Helix 12
12
A
167 178Right-handed alpha
Helix 13
13
A
184 189Right-handed 310
Helix 14
14
A
199 201Right-handed 310
Helix 15
15
A
202 212Right-handed alpha
Helix 16
16
A
216 249Right-handed alpha
Helix 17
17
A
259 268Right-handed alpha
Helix 18
18
A
272 278Right-handed alpha
Helix 19
19
A
279 281Right-handed 310
Helix 20
20
B
23 28Right-handed alpha
Helix 21
21
B
29 34Right-handed alpha
Helix 22
22
B
47 78Right-handed alpha
Helix 23
23
B
80 101Right-handed alpha
Helix 24
24
B
101 106Right-handed alpha
Helix 25
25
B
109 115Right-handed alpha
Helix 26
26
B
116 121Right-handed 310
Helix 27
27
B
124 127Right-handed 310
Helix 28
28
B
128 138Right-handed alpha
Helix 29
29
B
143 148Right-handed alpha
Helix 30
30
B
152 164Right-handed alpha
Helix 31
31
B
167 179Right-handed alpha
Helix 32
32
B
184 189Right-handed 310
Helix 33
33
B
201 212Right-handed alpha
Helix 34
34
B
216 248Right-handed alpha
Helix 35
35
B
259 268Right-handed alpha
Helix 36
36
B
272 278Right-handed alpha
Helix 37
37
B
279 281Right-handed 310
Helix 38
38
C
23 28Right-handed alpha
Helix 39
39
C
29 34Right-handed alpha
Helix 40
40
C
47 78Right-handed alpha
Helix 41
41
C
80 101Right-handed alpha
Helix 42
42
C
101 106Right-handed alpha
Helix 43
43
C
109 114Right-handed alpha
Helix 44
44
C
115 121Right-handed 310
Helix 45
45
C
124 127Right-handed 310
Helix 46
46
C
128 138Right-handed alpha
Helix 47
47
C
142 150Right-handed 310
Helix 48
48
C
152 164Right-handed alpha
Helix 49
49
C
167 179Right-handed alpha
Helix 50
50
C
202 212Right-handed alpha
Helix 51
51
C
216 249Right-handed alpha
Helix 52
52
C
259 268Right-handed alpha
Helix 53
53
C
272 278Right-handed alpha
Helix 54
54
C
279 281Right-handed 310
Helix 55
55
D
23 28Right-handed alpha
Helix 56
56
D
29 34Right-handed alpha
Helix 57
57
D
47 79Right-handed alpha
Helix 58
58
D
80 101Right-handed alpha
Helix 59
59
D
101 106Right-handed alpha
Helix 60
60
D
109 114Right-handed alpha
Helix 61
61
D
115 121Right-handed 310
Helix 62
62
D
124 127Right-handed 310
Helix 63
63
D
128 139Right-handed alpha
Helix 64
64
D
142 150Right-handed 310
Helix 65
65
D
155 165Right-handed alpha
Helix 66
66
D
167 179Right-handed alpha
Helix 67
67
D
184 189Right-handed 310
Helix 68
68
D
199 201Right-handed 310
Helix 69
69
D
202 212Right-handed alpha
Helix 70
70
D
216 248Right-handed alpha
Helix 71
71
D
259 268Right-handed alpha
Helix 72
72
D
272 278Right-handed alpha
Helix 73
73
D
279 281Right-handed 310
Helix 74
74
E
23 28Right-handed alpha
Helix 75
75
E
29 34Right-handed alpha
Helix 76
76
E
47 78Right-handed alpha
Helix 77
77
E
80 101Right-handed alpha
Helix 78
78
E
101 106Right-handed alpha
Helix 79
79
E
109 115Right-handed alpha
Helix 80
80
E
116 120Right-handed 310
Helix 81
81
E
124 127Right-handed 310
Helix 82
82
E
128 139Right-handed alpha
Helix 83
83
E
142 150Right-handed 310
Helix 84
84
E
152 164Right-handed alpha
Helix 85
85
E
167 179Right-handed alpha
Helix 86
86
E
184 189Right-handed 310
Helix 87
87
E
202 212Right-handed alpha
Helix 88
88
E
216 249Right-handed alpha
Helix 89
89
E
259 267Right-handed alpha
Helix 90
90
E
272 278Right-handed alpha
Helix 91
91
E
279 281Right-handed 310
Helix 92
92
F
23 28Right-handed alpha
Helix 93
93
F
29 34Right-handed alpha
Helix 94
94
F
47 78Right-handed alpha
Helix 95
95
F
80 101Right-handed alpha
Helix 96
96
F
101 106Right-handed alpha
Helix 97
97
F
109 114Right-handed alpha
Helix 98
98
F
115 121Right-handed 310
Helix 99
99
F
124 127Right-handed 310
Helix 100
100
F
128 139Right-handed alpha
Helix 101
101
F
142 147Right-handed 310
Helix 102
102
F
152 165Right-handed alpha
Helix 103
103
F
167 179Right-handed alpha
Helix 104
104
F
199 201Right-handed 310
Helix 105
105
F
202 212Right-handed alpha
Helix 106
106
F
216 249Right-handed alpha
Helix 107
107
F
259 268Right-handed alpha
Helix 108
108
F
272 278Right-handed alpha
Helix 109
109
G
23 28Right-handed alpha
Helix 110
110
G
29 34Right-handed alpha
Helix 111
111
G
47 78Right-handed alpha
Helix 112
112
G
80 101Right-handed alpha
Helix 113
113
G
102 108Right-handed 310
Helix 114
114
G
109 115Right-handed alpha
Helix 115
115
G
116 120Right-handed 310
Helix 116
116
G
124 127Right-handed 310
Helix 117
117
G
128 138Right-handed alpha
Helix 118
118
G
142 148Right-handed 310
Helix 119
119
G
152 164Right-handed alpha
Helix 120
120
G
167 179Right-handed alpha
Helix 121
121
G
184 189Right-handed 310
Helix 122
122
G
199 201Right-handed 310
Helix 123
123
G
202 211Right-handed alpha
Helix 124
124
G
216 248Right-handed alpha
Helix 125
125
G
259 268Right-handed alpha
Helix 126
126
G
272 278Right-handed alpha
Helix 127
127
G
279 281Right-handed 310
Helix 128
128
H
23 28Right-handed alpha
Helix 129
129
H
29 34Right-handed alpha
Helix 130
130
H
47 78Right-handed alpha
Helix 131
131
H
80 101Right-handed alpha
Helix 132
132
H
101 106Right-handed alpha
Helix 133
133
H
109 114Right-handed alpha
Helix 134
134
H
115 121Right-handed 310
Helix 135
135
H
124 127Right-handed 310
Helix 136
136
H
128 139Right-handed alpha
Helix 137
137
H
142 151Right-handed 310
Helix 138
138
H
152 164Right-handed alpha
Helix 139
139
H
167 178Right-handed alpha
Helix 140
140
H
199 201Right-handed 310
Helix 141
141
H
202 212Right-handed alpha
Helix 142
142
H
216 248Right-handed alpha
Helix 143
143
H
259 269Right-handed alpha
Helix 144
144
H
272 278Right-handed alpha
Helix 145
145
H
279 281Right-handed 310
Back to top of page
There are no sheets in PDB entry 3BK9

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il