Analysis of interatomic Contacts of Structural Units in PDB entry:
3BKP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3BKP entry

There is 1 chain in PDB entry 3BKP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 12ASP 206
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 3BKP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 16Right-handed 310
Helix 2
2
A
42 56Right-handed alpha
Helix 3
3
A
145 149Right-handed 310
Helix 4
4
A
162 170Right-handed alpha
Helix 5
5
A
175 179Right-handed 310
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There is 1 sheet ( A) in PDB entry 3BKP.

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 67first strand
Strand 2
A
71 74anti-parallel
Strand 3
A
138 141anti-parallel
Strand 4
A
109 112anti-parallel
Strand 5
A
154 158anti-parallel
Strand 6
A
31 37anti-parallel
Strand 7
A
23 28anti-parallel
Strand 8
A
186 193anti-parallel
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