Analysis of interatomic Contacts of Structural Units in PDB entry:
3BL5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3BL5 entry

There are 6 chains in PDB entry 3BL5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 3LYS 215
B
 LYS 3LYS 215
C
 LYS 3LYS 215
D
 LYS 3LYS 215
E
 LYS 3LYS 215
F
 LYS 3LYS 215
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 59 helices in PDB entry 3BL5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 27Right-handed alpha
Helix 2
2
A
42 54Right-handed alpha
Helix 3
3
A
65 71Right-handed 310
Helix 4
4
A
72 76Right-handed 310
Helix 5
5
A
96 113Right-handed alpha
Helix 6
6
A
129 132Right-handed 310
Helix 7
7
A
133 149Right-handed alpha
Helix 8
8
A
162 173Right-handed alpha
Helix 9
9
A
175 183Right-handed alpha
Helix 10
10
A
198 214Right-handed alpha
Helix 11
11
B
13 27Right-handed alpha
Helix 12
12
B
42 55Right-handed alpha
Helix 13
13
B
65 71Right-handed 310
Helix 14
14
B
72 76Right-handed 310
Helix 15
15
B
96 113Right-handed alpha
Helix 16
16
B
129 132Right-handed 310
Helix 17
17
B
133 149Right-handed alpha
Helix 18
18
B
162 173Right-handed alpha
Helix 19
19
B
175 183Right-handed alpha
Helix 20
20
B
198 214Right-handed alpha
Helix 21
21
C
13 25Right-handed alpha
Helix 22
22
C
44 55Right-handed alpha
Helix 23
23
C
65 76Right-handed 310
Helix 24
24
C
96 112Right-handed alpha
Helix 25
25
C
129 132Right-handed 310
Helix 26
26
C
133 149Right-handed alpha
Helix 27
27
C
162 173Right-handed alpha
Helix 28
28
C
175 183Right-handed alpha
Helix 29
29
C
198 214Right-handed alpha
Helix 30
30
D
13 25Right-handed alpha
Helix 31
31
D
44 55Right-handed alpha
Helix 32
32
D
65 76Right-handed 310
Helix 33
33
D
96 112Right-handed alpha
Helix 34
34
D
129 132Right-handed 310
Helix 35
35
D
133 148Right-handed alpha
Helix 36
36
D
162 173Right-handed alpha
Helix 37
37
D
175 183Right-handed alpha
Helix 38
38
D
198 214Right-handed alpha
Helix 39
39
E
13 27Right-handed alpha
Helix 40
40
E
42 55Right-handed alpha
Helix 41
41
E
65 71Right-handed 310
Helix 42
42
E
72 76Right-handed 310
Helix 43
43
E
96 113Right-handed alpha
Helix 44
44
E
129 132Right-handed 310
Helix 45
45
E
133 149Right-handed alpha
Helix 46
46
E
162 173Right-handed alpha
Helix 47
47
E
175 183Right-handed alpha
Helix 48
48
E
198 214Right-handed alpha
Helix 49
49
F
13 27Right-handed alpha
Helix 50
50
F
42 56Right-handed alpha
Helix 51
51
F
65 69Right-handed 310
Helix 52
52
F
71 75Right-handed 310
Helix 53
53
F
96 113Right-handed alpha
Helix 54
54
F
129 132Right-handed 310
Helix 55
55
F
133 149Right-handed alpha
Helix 56
56
F
156 161Right-handed 310
Helix 57
57
F
162 174Right-handed alpha
Helix 58
58
F
175 181Right-handed alpha
Helix 59
59
F
198 213Right-handed alpha
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There are 6 sheets in PDB entry 3BL5. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 63first strand
Strand 2
A
29 36parallel
Strand 3
A
5 9parallel
Strand 4
A
116 118parallel
Strand 5
A
153 155parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
59 63first strand
Strand 2
B
29 36parallel
Strand 3
B
5 9parallel
Strand 4
B
116 118parallel
Strand 5
B
153 155parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
59 63first strand
Strand 2
C
29 36parallel
Strand 3
C
5 9parallel
Strand 4
C
116 119parallel
Strand 5
C
153 155parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
59 63first strand
Strand 2
D
29 36parallel
Strand 3
D
5 9parallel
Strand 4
D
116 118parallel
Strand 5
D
153 155parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
59 63first strand
Strand 2
E
29 36parallel
Strand 3
E
5 9parallel
Strand 4
E
116 118parallel
Strand 5
E
153 155parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
59 63first strand
Strand 2
F
29 36parallel
Strand 3
F
5 9parallel
Strand 4
F
116 118parallel
Strand 5
F
153 155parallel
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