Analysis of interatomic Contacts of Structural Units in PDB entry:
3BL8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3BL8 entry

There are 4 chains in PDB entry 3BL8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 40HIS 609
B
 GLN 40LEU 608
C
 LYS 41ASN 610
D
 LYS 41ASN 610
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 88 helices in PDB entry 3BL8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
120 126Right-handed alpha
Helix 2
2
A
126 132Right-handed alpha
Helix 3
3
A
133 135Right-handed 310
Helix 4
4
A
192 196Right-handed 310
Helix 5
5
A
198 206Right-handed alpha
Helix 6
6
A
216 222Right-handed alpha
Helix 7
7
A
232 249Right-handed alpha
Helix 8
8
A
250 252Right-handed 310
Helix 9
9
A
265 277Right-handed alpha
Helix 10
10
A
303 316Right-handed alpha
Helix 11
11
A
321 330Right-handed alpha
Helix 12
12
A
333 339Right-handed alpha
Helix 13
13
A
363 371Right-handed alpha
Helix 14
14
A
389 395Right-handed 310
Helix 15
15
A
402 417Right-handed alpha
Helix 16
16
A
423 436Right-handed alpha
Helix 17
17
A
443 460Right-handed alpha
Helix 18
18
A
460 474Right-handed alpha
Helix 19
19
A
503 509Right-handed alpha
Helix 20
20
A
509 514Right-handed alpha
Helix 21
21
A
524 545Right-handed alpha
Helix 22
22
A
563 567Right-handed 310
Helix 23
23
A
594 603Right-handed alpha
Helix 24
24
A
605 609Right-handed 310
Helix 25
25
B
120 126Right-handed alpha
Helix 26
26
B
126 132Right-handed alpha
Helix 27
27
B
198 204Right-handed alpha
Helix 28
28
B
216 221Right-handed alpha
Helix 29
29
B
232 249Right-handed alpha
Helix 30
30
B
250 252Right-handed 310
Helix 31
31
B
265 277Right-handed alpha
Helix 32
32
B
303 316Right-handed alpha
Helix 33
33
B
321 330Right-handed alpha
Helix 34
34
B
333 339Right-handed alpha
Helix 35
35
B
363 370Right-handed alpha
Helix 36
36
B
387 395Right-handed 310
Helix 37
37
B
406 416Right-handed alpha
Helix 38
38
B
420 424Right-handed 310
Helix 39
39
B
425 435Right-handed alpha
Helix 40
40
B
445 460Right-handed alpha
Helix 41
41
B
460 474Right-handed alpha
Helix 42
42
B
503 508Right-handed alpha
Helix 43
43
B
524 545Right-handed alpha
Helix 44
44
B
594 603Right-handed alpha
Helix 45
45
B
604 608Right-handed 310
Helix 46
46
C
79 83Right-handed 310
Helix 47
47
C
120 126Right-handed alpha
Helix 48
48
C
126 131Right-handed alpha
Helix 49
49
C
132 135Right-handed 310
Helix 50
50
C
192 196Right-handed 310
Helix 51
51
C
198 206Right-handed alpha
Helix 52
52
C
232 249Right-handed alpha
Helix 53
53
C
250 252Right-handed 310
Helix 54
54
C
265 277Right-handed alpha
Helix 55
55
C
303 316Right-handed alpha
Helix 56
56
C
321 330Right-handed alpha
Helix 57
57
C
333 339Right-handed alpha
Helix 58
58
C
363 371Right-handed alpha
Helix 59
59
C
387 392Right-handed 310
Helix 60
60
C
402 418Right-handed alpha
Helix 61
61
C
422 435Right-handed alpha
Helix 62
62
C
444 460Right-handed alpha
Helix 63
63
C
460 474Right-handed alpha
Helix 64
64
C
503 508Right-handed alpha
Helix 65
65
C
524 545Right-handed alpha
Helix 66
66
C
594 603Right-handed alpha
Helix 67
67
C
603 608Right-handed alpha
Helix 68
68
D
120 126Right-handed alpha
Helix 69
69
D
126 134Right-handed alpha
Helix 70
70
D
192 196Right-handed 310
Helix 71
71
D
197 206Right-handed alpha
Helix 72
72
D
216 220Right-handed 310
Helix 73
73
D
232 249Right-handed alpha
Helix 74
74
D
265 276Right-handed alpha
Helix 75
75
D
296 300Right-handed 310
Helix 76
76
D
303 316Right-handed alpha
Helix 77
77
D
321 330Right-handed alpha
Helix 78
78
D
333 339Right-handed alpha
Helix 79
79
D
363 370Right-handed alpha
Helix 80
80
D
387 391Right-handed 310
Helix 81
81
D
402 418Right-handed alpha
Helix 82
82
D
423 435Right-handed alpha
Helix 83
83
D
444 460Right-handed alpha
Helix 84
84
D
460 473Right-handed alpha
Helix 85
85
D
503 509Right-handed alpha
Helix 86
86
D
524 545Right-handed alpha
Helix 87
87
D
594 603Right-handed alpha
Helix 88
88
D
605 609Right-handed 310
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There are 9 sheets in PDB entry 3BL8. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 51first strand
Strand 2
A
96 97parallel
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There are 11 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 56first strand
Strand 2
A
66 73anti-parallel
Strand 3
A
143 149anti-parallel
Strand 4
A
208 212anti-parallel
Strand 5
A
177 183parallel
Strand 6
A
254 264parallel
Strand 7
A
286 290parallel
Strand 8
A
377 383parallel
Strand 9
A
478 484parallel
Strand 10
A
579 584parallel
Strand 11
A
589 591anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 46first strand
Strand 2
B
49 52anti-parallel
Strand 3
B
96 98parallel
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There are 11 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
54 56first strand
Strand 2
B
66 73anti-parallel
Strand 3
B
143 149anti-parallel
Strand 4
B
208 212anti-parallel
Strand 5
B
177 183parallel
Strand 6
B
254 264parallel
Strand 7
B
286 290parallel
Strand 8
B
377 383parallel
Strand 9
B
478 484parallel
Strand 10
B
580 584parallel
Strand 11
B
588 590anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
43 46first strand
Strand 2
C
49 52anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
54 57first strand
Strand 2
C
65 73anti-parallel
Strand 3
C
143 149anti-parallel
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There are 8 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
208 210first strand
Strand 2
C
177 183parallel
Strand 3
C
254 264parallel
Strand 4
C
286 290parallel
Strand 5
C
377 383parallel
Strand 6
C
478 483parallel
Strand 7
C
580 583parallel
Strand 8
C
588 590anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
43 45first strand
Strand 2
D
50 52anti-parallel
Strand 3
D
96 98parallel
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There are 11 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
54 56first strand
Strand 2
D
66 73anti-parallel
Strand 3
D
143 149anti-parallel
Strand 4
D
208 211anti-parallel
Strand 5
D
177 183parallel
Strand 6
D
254 263parallel
Strand 7
D
286 290parallel
Strand 8
D
377 383parallel
Strand 9
D
478 484parallel
Strand 10
D
580 584parallel
Strand 11
D
589 590anti-parallel
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