Analysis of interatomic Contacts of Structural Units in PDB entry:
3BLV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3BLV entry

There are 8 chains in PDB entry 3BLV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 14MSE 349
B
 LYS 4LEU 354
C
 ALA 1MSE 349
D
 LYS 4LEU 354
E
 ALA 1MSE 349
F
 LYS 4LEU 354
G
 TYR 14MSE 349
H
 LYS 4LEU 354
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are116 helices in PDB entry 3BLV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
28 42Right-handed alpha
Helix 2
2
A
62 74Right-handed alpha
Helix 3
3
A
94 102Right-handed alpha
Helix 4
4
A
156 173Right-handed alpha
Helix 5
5
A
189 201Right-handed alpha
Helix 6
6
A
216 226Right-handed alpha
Helix 7
7
A
227 230Right-handed 310
Helix 8
8
A
236 251Right-handed alpha
Helix 9
9
A
277 281Right-handed 310
Helix 10
10
A
288 302Right-handed alpha
Helix 11
11
A
305 321Right-handed alpha
Helix 12
12
A
326 330Right-handed 310
Helix 13
13
A
334 347Right-handed alpha
Helix 14
14
B
6 10Right-handed 310
Helix 15
15
B
32 47Right-handed alpha
Helix 16
16
B
62 66Right-handed 310
Helix 17
17
B
70 80Right-handed alpha
Helix 18
18
B
98 106Right-handed alpha
Helix 19
19
B
139 143Right-handed 310
Helix 20
20
B
162 179Right-handed alpha
Helix 21
21
B
193 209Right-handed alpha
Helix 22
22
B
221 231Right-handed alpha
Helix 23
23
B
232 236Right-handed 310
Helix 24
24
B
243 260Right-handed alpha
Helix 25
25
B
295 310Right-handed alpha
Helix 26
26
B
311 321Right-handed alpha
Helix 27
27
B
322 325Right-handed 310
Helix 28
28
B
334 338Right-handed 310
Helix 29
29
B
342 353Right-handed alpha
Helix 30
30
C
28 42Right-handed alpha
Helix 31
31
C
62 74Right-handed alpha
Helix 32
32
C
94 102Right-handed alpha
Helix 33
33
C
156 173Right-handed alpha
Helix 34
34
C
189 201Right-handed alpha
Helix 35
35
C
216 226Right-handed alpha
Helix 36
36
C
227 230Right-handed 310
Helix 37
37
C
236 251Right-handed alpha
Helix 38
38
C
277 281Right-handed 310
Helix 39
39
C
288 302Right-handed alpha
Helix 40
40
C
305 321Right-handed alpha
Helix 41
41
C
326 330Right-handed 310
Helix 42
42
C
334 347Right-handed alpha
Helix 43
43
D
32 47Right-handed alpha
Helix 44
44
D
62 66Right-handed 310
Helix 45
45
D
70 80Right-handed alpha
Helix 46
46
D
98 108Right-handed alpha
Helix 47
47
D
139 143Right-handed 310
Helix 48
48
D
162 179Right-handed alpha
Helix 49
49
D
195 209Right-handed alpha
Helix 50
50
D
221 231Right-handed alpha
Helix 51
51
D
232 236Right-handed 310
Helix 52
52
D
243 260Right-handed alpha
Helix 53
53
D
295 310Right-handed alpha
Helix 54
54
D
311 321Right-handed alpha
Helix 55
55
D
322 325Right-handed 310
Helix 56
56
D
334 338Right-handed 310
Helix 57
57
D
342 353Right-handed alpha
Helix 58
58
E
28 42Right-handed alpha
Helix 59
59
E
62 74Right-handed alpha
Helix 60
60
E
94 102Right-handed alpha
Helix 61
61
E
156 173Right-handed alpha
Helix 62
62
E
189 204Right-handed alpha
Helix 63
63
E
216 226Right-handed alpha
Helix 64
64
E
227 230Right-handed 310
Helix 65
65
E
236 252Right-handed alpha
Helix 66
66
E
253 257Right-handed 310
Helix 67
67
E
277 281Right-handed 310
Helix 68
68
E
288 302Right-handed alpha
Helix 69
69
E
305 321Right-handed alpha
Helix 70
70
E
326 330Right-handed 310
Helix 71
71
E
334 347Right-handed alpha
Helix 72
72
F
6 10Right-handed 310
Helix 73
73
F
32 47Right-handed alpha
Helix 74
74
F
62 66Right-handed 310
Helix 75
75
F
70 80Right-handed alpha
Helix 76
76
F
98 106Right-handed alpha
Helix 77
77
F
139 143Right-handed 310
Helix 78
78
F
162 179Right-handed alpha
Helix 79
79
F
193 209Right-handed alpha
Helix 80
80
F
221 231Right-handed alpha
Helix 81
81
F
232 236Right-handed 310
Helix 82
82
F
243 260Right-handed alpha
Helix 83
83
F
295 310Right-handed alpha
Helix 84
84
F
311 321Right-handed alpha
Helix 85
85
F
322 325Right-handed 310
Helix 86
86
F
334 338Right-handed 310
Helix 87
87
F
342 353Right-handed alpha
Helix 88
88
G
28 42Right-handed alpha
Helix 89
89
G
62 74Right-handed alpha
Helix 90
90
G
94 102Right-handed alpha
Helix 91
91
G
156 173Right-handed alpha
Helix 92
92
G
189 201Right-handed alpha
Helix 93
93
G
216 226Right-handed alpha
Helix 94
94
G
227 230Right-handed 310
Helix 95
95
G
236 252Right-handed alpha
Helix 96
96
G
277 281Right-handed 310
Helix 97
97
G
288 302Right-handed alpha
Helix 98
98
G
305 321Right-handed alpha
Helix 99
99
G
326 330Right-handed 310
Helix 100
100
G
334 347Right-handed alpha
Helix 101
101
H
6 10Right-handed 310
Helix 102
102
H
32 47Right-handed alpha
Helix 103
103
H
70 80Right-handed alpha
Helix 104
104
H
98 106Right-handed alpha
Helix 105
105
H
139 143Right-handed 310
Helix 106
106
H
162 179Right-handed alpha
Helix 107
107
H
193 209Right-handed alpha
Helix 108
108
H
221 231Right-handed alpha
Helix 109
109
H
232 236Right-handed 310
Helix 110
110
H
243 260Right-handed alpha
Helix 111
111
H
284 288Right-handed 310
Helix 112
112
H
295 310Right-handed alpha
Helix 113
113
H
311 321Right-handed alpha
Helix 114
114
H
322 325Right-handed 310
Helix 115
115
H
334 338Right-handed 310
Helix 116
116
H
342 353Right-handed alpha
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There are 18 sheets in PDB entry 3BLV. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 51first strand
Strand 2
A
18 23parallel
Strand 3
A
75 78parallel
Strand 4
A
267 271parallel
Strand 5
A
258 262anti-parallel
Strand 6
A
105 111anti-parallel
Strand 7
A
124 130anti-parallel
Strand 8
A
232 235parallel
Strand 9
A
177 182parallel
Strand 10
A
210 215parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
134 142first strand
Strand 2
A
147 155anti-parallel
Strand 3
B
153 161anti-parallel
Strand 4
B
146 150anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
22 24first strand
Strand 2
B
51 53parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
83 85first strand
Strand 2
B
275 279parallel
Strand 3
B
266 271anti-parallel
Strand 4
B
109 117anti-parallel
Strand 5
B
130 136anti-parallel
Strand 6
B
240 242parallel
Strand 7
B
183 188parallel
Strand 8
B
215 220parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
13 14first strand
Strand 2
C
17 23anti-parallel
Strand 3
C
47 51parallel
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There are 10 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
13 14first strand
Strand 2
C
17 23anti-parallel
Strand 3
C
75 78parallel
Strand 4
C
267 269parallel
Strand 5
C
258 262anti-parallel
Strand 6
C
105 111anti-parallel
Strand 7
C
124 130anti-parallel
Strand 8
C
232 235parallel
Strand 9
C
177 182parallel
Strand 10
C
210 215parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
134 142first strand
Strand 2
C
147 155anti-parallel
Strand 3
D
153 161anti-parallel
Strand 4
D
146 150anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
22 24first strand
Strand 2
D
51 53parallel
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There are 7 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
215 220first strand
Strand 2
D
183 188parallel
Strand 3
D
240 242parallel
Strand 4
D
130 136parallel
Strand 5
D
109 117anti-parallel
Strand 6
D
266 271anti-parallel
Strand 7
D
275 279anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
13 14first strand
Strand 2
E
17 23anti-parallel
Strand 3
E
47 51parallel
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There are 10 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
13 14first strand
Strand 2
E
17 23anti-parallel
Strand 3
E
75 78parallel
Strand 4
E
267 269parallel
Strand 5
E
258 262anti-parallel
Strand 6
E
105 111anti-parallel
Strand 7
E
124 130anti-parallel
Strand 8
E
232 235parallel
Strand 9
E
177 182parallel
Strand 10
E
210 215parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
134 142first strand
Strand 2
E
147 155anti-parallel
Strand 3
F
153 161anti-parallel
Strand 4
F
146 150anti-parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
22 24first strand
Strand 2
F
51 53parallel
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There are 8 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
83 85first strand
Strand 2
F
275 279parallel
Strand 3
F
266 271anti-parallel
Strand 4
F
109 117anti-parallel
Strand 5
F
130 136anti-parallel
Strand 6
F
240 242parallel
Strand 7
F
183 188parallel
Strand 8
F
215 220parallel
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There are 10 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
47 51first strand
Strand 2
G
18 23parallel
Strand 3
G
75 78parallel
Strand 4
G
267 271parallel
Strand 5
G
258 262anti-parallel
Strand 6
G
105 111anti-parallel
Strand 7
G
124 130anti-parallel
Strand 8
G
232 235parallel
Strand 9
G
177 182parallel
Strand 10
G
210 215parallel
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There are 4 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
134 142first strand
Strand 2
G
147 155anti-parallel
Strand 3
H
153 161anti-parallel
Strand 4
H
146 150anti-parallel
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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
22 24first strand
Strand 2
H
51 53parallel
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There are 7 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
215 220first strand
Strand 2
H
183 188parallel
Strand 3
H
240 242parallel
Strand 4
H
130 136parallel
Strand 5
H
109 117anti-parallel
Strand 6
H
266 271anti-parallel
Strand 7
H
275 279anti-parallel
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