Analysis of interatomic Contacts of Structural Units in PDB entry:
3BO6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3BO6 entry

There are 2 chains in PDB entry 3BO6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 22GLU 241
B
 SER 27GLU 241
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 3BO6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
27 36Right-handed alpha
Helix 2
2
A
36 46Right-handed alpha
Helix 3
3
A
60 66Right-handed alpha
Helix 4
4
A
110 112Right-handed 310
Helix 5
5
A
113 126Right-handed alpha
Helix 6
6
A
169 190Right-handed alpha
Helix 7
7
A
223 225Right-handed 310
Helix 8
8
A
226 232Right-handed alpha
Helix 9
9
A
233 241Right-handed alpha
Helix 10
10
B
27 36Right-handed alpha
Helix 11
11
B
36 47Right-handed alpha
Helix 12
12
B
61 65Right-handed 310
Helix 13
13
B
110 112Right-handed 310
Helix 14
14
B
113 126Right-handed alpha
Helix 15
15
B
169 190Right-handed alpha
Helix 16
16
B
223 232Right-handed alpha
Helix 17
17
B
233 241Right-handed alpha
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There are 2 sheets in PDB entry 3BO6. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 73first strand
Strand 2
A
76 80anti-parallel
Strand 3
A
86 91anti-parallel
Strand 4
A
134 138anti-parallel
Strand 5
A
155 158anti-parallel
Strand 6
A
103 107anti-parallel
Strand 7
A
210 214anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
72 73first strand
Strand 2
B
76 79anti-parallel
Strand 3
B
86 91anti-parallel
Strand 4
B
134 138anti-parallel
Strand 5
B
155 158anti-parallel
Strand 6
B
103 107anti-parallel
Strand 7
B
210 214anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il