Analysis of interatomic Contacts of Structural Units in PDB entry:
3BO7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3BO7 entry

There are 12 chains in PDB entry 3BO7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 5PHE 176
B
 LYS 5GLU 177
C
 LYS 5GLU 177
D
 LYS 4GLU 177
E
 VAL 9VAL 9
E
 ALA 11ALA 11
F
 VAL 9VAL 9
F
 ALA 11ALA 11
G
 VAL 9VAL 9
G
 ALA 11ALA 11
H
 VAL 9VAL 9
H
 ALA 11ALA 11
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 3BO7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
27 40Right-handed alpha
Helix 2
2
A
61 65Right-handed 310
Helix 3
3
A
126 130Right-handed 310
Helix 4
4
A
142 150Right-handed alpha
Helix 5
5
B
27 39Right-handed alpha
Helix 6
6
B
61 65Right-handed 310
Helix 7
7
B
126 130Right-handed 310
Helix 8
8
B
142 150Right-handed alpha
Helix 9
9
C
27 40Right-handed alpha
Helix 10
10
C
61 65Right-handed 310
Helix 11
11
C
126 130Right-handed 310
Helix 12
12
C
142 151Right-handed alpha
Helix 13
13
D
27 39Right-handed alpha
Helix 14
14
D
61 65Right-handed 310
Helix 15
15
D
126 130Right-handed 310
Helix 16
16
D
142 151Right-handed alpha
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There are 4 sheets in PDB entry 3BO7. Click on sheet of interest to get list of strands forming it: AA, BA, CA, A,

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 52first strand
Strand 2
A
56 59anti-parallel
Strand 3
A
119 122anti-parallel
Strand 4
A
104 107anti-parallel
Strand 5
A
135 141anti-parallel
Strand 6
A
16 22anti-parallel
Strand 7
A
7 13anti-parallel
Strand 8
A
166 173anti-parallel
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There are 8 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 52first strand
Strand 2
B
56 59anti-parallel
Strand 3
B
119 122anti-parallel
Strand 4
B
104 107anti-parallel
Strand 5
B
135 141anti-parallel
Strand 6
B
16 22anti-parallel
Strand 7
B
7 13anti-parallel
Strand 8
B
166 173anti-parallel
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There are 8 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
48 51first strand
Strand 2
C
56 59anti-parallel
Strand 3
C
119 122anti-parallel
Strand 4
C
104 107anti-parallel
Strand 5
C
135 141anti-parallel
Strand 6
C
16 22anti-parallel
Strand 7
C
7 13anti-parallel
Strand 8
C
166 173anti-parallel
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There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
48 52first strand
Strand 2
D
56 59anti-parallel
Strand 3
D
119 122anti-parallel
Strand 4
D
104 107anti-parallel
Strand 5
D
135 141anti-parallel
Strand 6
D
16 22anti-parallel
Strand 7
D
7 13anti-parallel
Strand 8
D
166 173anti-parallel
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