Analysis of interatomic Contacts of Structural Units in PDB entry:
3BOA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3BOA entry

There is 1 chain in PDB entry 3BOA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 24ASP 513
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 3BOA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
38 40Right-handed 310
Helix 2
2
A
41 47Right-handed alpha
Helix 3
3
A
61 66Right-handed alpha
Helix 4
4
A
67 74Right-handed alpha
Helix 5
5
A
94 99Right-handed alpha
Helix 6
6
A
127 135Right-handed alpha
Helix 7
7
A
148 156Right-handed alpha
Helix 8
8
A
170 183Right-handed alpha
Helix 9
9
A
227 237Right-handed alpha
Helix 10
10
A
245 254Right-handed alpha
Helix 11
11
A
266 284Right-handed alpha
Helix 12
12
A
301 306Right-handed 310
Helix 13
13
A
331 335Right-handed 310
Helix 14
14
A
345 359Right-handed alpha
Helix 15
15
A
382 392Right-handed alpha
Helix 16
16
A
412 426Right-handed alpha
Helix 17
17
A
472 483Right-handed alpha
Helix 18
18
A
489 504Right-handed alpha
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There are 4 sheets in PDB entry 3BOA. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
84 89first strand
Strand 2
A
52 57parallel
Strand 3
A
109 111anti-parallel
Strand 4
A
120 121anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
189 192first strand
Strand 2
A
162 165parallel
Strand 3
A
203 205anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
242 243first strand
Strand 2
A
289 294parallel
Strand 3
A
259 264parallel
Strand 4
A
314 318anti-parallel
Strand 5
A
323 326anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
379 381first strand
Strand 2
A
432 436parallel
Strand 3
A
397 402parallel
Strand 4
A
452 456anti-parallel
Strand 5
A
465 466anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il