Analysis of interatomic Contacts of Structural Units in PDB entry:
3BOH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3BOH entry

There are 2 chains in PDB entry 3BOH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 10PRO 222
B
 SER 10PRO 222
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 3BOH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 26Right-handed alpha
Helix 2
2
A
36 39Right-handed 310
Helix 3
3
A
73 81Right-handed alpha
Helix 4
4
A
84 98Right-handed alpha
Helix 5
5
A
110 114Right-handed 310
Helix 6
6
A
115 123Right-handed alpha
Helix 7
7
A
126 130Right-handed 310
Helix 8
8
A
137 148Right-handed alpha
Helix 9
9
A
187 193Right-handed alpha
Helix 10
10
A
196 211Right-handed alpha
Helix 11
11
B
15 26Right-handed alpha
Helix 12
12
B
36 42Right-handed 310
Helix 13
13
B
73 81Right-handed alpha
Helix 14
14
B
84 98Right-handed alpha
Helix 15
15
B
110 114Right-handed 310
Helix 16
16
B
115 123Right-handed alpha
Helix 17
17
B
126 130Right-handed 310
Helix 18
18
B
137 148Right-handed alpha
Helix 19
19
B
187 193Right-handed alpha
Helix 20
20
B
196 211Right-handed alpha
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There are 6 sheets in PDB entry 3BOH. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 34first strand
Strand 2
A
216 221parallel
Strand 3
A
164 167parallel
Strand 4
A
183 186parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 44first strand
Strand 2
A
172 173anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 51first strand
Strand 2
A
101 107parallel
Strand 3
A
151 155parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
29 34first strand
Strand 2
B
216 221parallel
Strand 3
B
164 167parallel
Strand 4
B
183 186parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 44first strand
Strand 2
B
172 173anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
50 51first strand
Strand 2
B
101 107parallel
Strand 3
B
151 155parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il