Analysis of interatomic Contacts of Structural Units in PDB entry:
3BOW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3BOW entry

There are 3 chains in PDB entry 3BOW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 23ALA 704
B
 SER 97SER 270
C
 GLU 571ASP 661
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 3BOW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
28 30Right-handed 310
Helix 2
2
A
31 42Right-handed alpha
Helix 3
3
A
54 58Right-handed 310
Helix 4
4
A
67 71Right-handed 310
Helix 5
5
A
77 82Right-handed alpha
Helix 6
6
A
93 97Right-handed 310
Helix 7
7
A
104 115Right-handed alpha
Helix 8
8
A
117 125Right-handed alpha
Helix 9
9
A
176 189Right-handed alpha
Helix 10
10
A
192 196Right-handed 310
Helix 11
11
A
199 209Right-handed alpha
Helix 12
12
A
223 234Right-handed alpha
Helix 13
13
A
301 307Right-handed 310
Helix 14
14
A
308 316Right-handed alpha
Helix 15
15
A
328 335Right-handed alpha
Helix 16
16
A
377 382Right-handed alpha
Helix 17
17
A
392 396Right-handed 310
Helix 18
18
A
398 402Right-handed 310
Helix 19
19
A
416 423Right-handed 310
Helix 20
20
A
437 441Right-handed 310
Helix 21
21
A
449 456Right-handed alpha
Helix 22
22
A
526 530Right-handed 310
Helix 23
23
A
531 543Right-handed alpha
Helix 24
24
A
544 546Right-handed 310
Helix 25
25
A
549 562Right-handed alpha
Helix 26
26
A
573 585Right-handed alpha
Helix 27
27
A
593 615Right-handed alpha
Helix 28
28
A
624 634Right-handed alpha
Helix 29
29
A
639 651Right-handed alpha
Helix 30
30
A
658 677Right-handed alpha
Helix 31
31
A
691 701Right-handed alpha
Helix 32
32
B
98 112Right-handed alpha
Helix 33
33
B
118 131Right-handed alpha
Helix 34
34
B
142 154Right-handed alpha
Helix 35
35
B
162 183Right-handed alpha
Helix 36
36
B
195 203Right-handed alpha
Helix 37
37
B
208 220Right-handed alpha
Helix 38
38
B
227 249Right-handed alpha
Helix 39
39
B
260 268Right-handed alpha
Helix 40
40
C
572 582Right-handed alpha
Helix 41
41
C
615 619Right-handed 310
Helix 42
42
C
620 628Right-handed alpha
Helix 43
43
C
651 660Right-handed alpha
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There are 9 sheets in PDB entry 3BOW. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
25 26first strand
Strand 2
A
148 155parallel
Strand 3
A
138 145anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 76first strand
Strand 2
A
158 161anti-parallel
Strand 3
A
164 165anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
211 216first strand
Strand 2
A
337 342anti-parallel
Strand 3
A
237 241anti-parallel
Strand 4
A
264 274anti-parallel
Strand 5
A
277 285anti-parallel
Strand 6
A
323 327anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
355 365first strand
Strand 2
A
495 505anti-parallel
Strand 3
A
405 414anti-parallel
Strand 4
A
470 477anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
387 391first strand
Strand 2
A
480 488anti-parallel
Strand 3
A
429 435anti-parallel
Strand 4
A
460 461anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
465 466first strand
Strand 2
C
606 607parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
517 518first strand
Strand 2
A
636 637anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
622 623first strand
Strand 2
A
656 657anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
686 690first strand
Strand 2
B
255 259anti-parallel
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