Analysis of interatomic Contacts of Structural Units in PDB entry:
3BP9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3BP9 entry

There are 24 chains in PDB entry 3BP9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 1ARG 131
B
 PRO 1ARG 131
C
 PRO 1ARG 131
D
 PRO 1ARG 131
E
 PRO 1SER 132
F
 PRO 1ARG 131
G
 PRO 1ARG 131
H
 PRO 1ARG 131
I
 PRO 1ARG 131
J
 PRO 1SER 132
K
 PRO 1ARG 131
L
 PRO 1ARG 131
M
 PRO 1SER 132
N
 PRO 1SER 132
O
 PRO 1ARG 131
P
 PRO 1ARG 131
Q
 PRO 1ARG 131
R
 PRO 1ARG 131
S
 PRO 1SER 132
T
 PRO 1SER 132
U
 PRO 1ARG 131
V
 PRO 1ARG 131
X
 PRO 1SER 132
Y
 PRO 1ARG 131
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are144 helices in PDB entry 3BP9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 27Right-handed alpha
Helix 2
2
A
33 48Right-handed alpha
Helix 3
3
A
51 63Right-handed alpha
Helix 4
4
A
64 78Right-handed alpha
Helix 5
5
A
89 97Right-handed alpha
Helix 6
6
A
108 131Right-handed alpha
Helix 7
7
B
16 26Right-handed alpha
Helix 8
8
B
33 48Right-handed alpha
Helix 9
9
B
51 63Right-handed alpha
Helix 10
10
B
64 78Right-handed alpha
Helix 11
11
B
89 97Right-handed alpha
Helix 12
12
B
108 130Right-handed alpha
Helix 13
13
C
16 26Right-handed alpha
Helix 14
14
C
33 48Right-handed alpha
Helix 15
15
C
51 63Right-handed alpha
Helix 16
16
C
64 78Right-handed alpha
Helix 17
17
C
89 97Right-handed alpha
Helix 18
18
C
108 131Right-handed alpha
Helix 19
19
D
16 26Right-handed alpha
Helix 20
20
D
33 48Right-handed alpha
Helix 21
21
D
51 63Right-handed alpha
Helix 22
22
D
64 78Right-handed alpha
Helix 23
23
D
89 97Right-handed alpha
Helix 24
24
D
108 131Right-handed alpha
Helix 25
25
E
16 26Right-handed alpha
Helix 26
26
E
33 48Right-handed alpha
Helix 27
27
E
51 63Right-handed alpha
Helix 28
28
E
64 77Right-handed alpha
Helix 29
29
E
89 97Right-handed alpha
Helix 30
30
E
108 132Right-handed alpha
Helix 31
31
F
16 26Right-handed alpha
Helix 32
32
F
33 48Right-handed alpha
Helix 33
33
F
51 63Right-handed alpha
Helix 34
34
F
64 78Right-handed alpha
Helix 35
35
F
89 97Right-handed alpha
Helix 36
36
F
108 131Right-handed alpha
Helix 37
37
G
16 26Right-handed alpha
Helix 38
38
G
34 48Right-handed alpha
Helix 39
39
G
51 63Right-handed alpha
Helix 40
40
G
64 78Right-handed alpha
Helix 41
41
G
89 97Right-handed alpha
Helix 42
42
G
108 131Right-handed alpha
Helix 43
43
H
16 26Right-handed alpha
Helix 44
44
H
33 48Right-handed alpha
Helix 45
45
H
51 63Right-handed alpha
Helix 46
46
H
64 77Right-handed alpha
Helix 47
47
H
89 97Right-handed alpha
Helix 48
48
H
108 131Right-handed alpha
Helix 49
49
I
16 26Right-handed alpha
Helix 50
50
I
33 48Right-handed alpha
Helix 51
51
I
51 63Right-handed alpha
Helix 52
52
I
64 78Right-handed alpha
Helix 53
53
I
89 97Right-handed alpha
Helix 54
54
I
108 131Right-handed alpha
Helix 55
55
J
16 26Right-handed alpha
Helix 56
56
J
33 49Right-handed alpha
Helix 57
57
J
51 63Right-handed alpha
Helix 58
58
J
64 78Right-handed alpha
Helix 59
59
J
89 97Right-handed alpha
Helix 60
60
J
108 132Right-handed alpha
Helix 61
61
K
16 26Right-handed alpha
Helix 62
62
K
33 49Right-handed alpha
Helix 63
63
K
51 63Right-handed alpha
Helix 64
64
K
64 78Right-handed alpha
Helix 65
65
K
89 97Right-handed alpha
Helix 66
66
K
108 130Right-handed alpha
Helix 67
67
L
16 26Right-handed alpha
Helix 68
68
L
33 48Right-handed alpha
Helix 69
69
L
51 63Right-handed alpha
Helix 70
70
L
64 78Right-handed alpha
Helix 71
71
L
89 97Right-handed alpha
Helix 72
72
L
108 131Right-handed alpha
Helix 73
73
M
16 26Right-handed alpha
Helix 74
74
M
33 48Right-handed alpha
Helix 75
75
M
51 63Right-handed alpha
Helix 76
76
M
64 77Right-handed alpha
Helix 77
77
M
89 97Right-handed alpha
Helix 78
78
M
108 130Right-handed alpha
Helix 79
79
N
16 26Right-handed alpha
Helix 80
80
N
33 49Right-handed alpha
Helix 81
81
N
51 63Right-handed alpha
Helix 82
82
N
64 78Right-handed alpha
Helix 83
83
N
89 97Right-handed alpha
Helix 84
84
N
108 130Right-handed alpha
Helix 85
85
O
16 26Right-handed alpha
Helix 86
86
O
33 48Right-handed alpha
Helix 87
87
O
51 63Right-handed alpha
Helix 88
88
O
64 78Right-handed alpha
Helix 89
89
O
89 97Right-handed alpha
Helix 90
90
O
108 130Right-handed alpha
Helix 91
91
P
16 26Right-handed alpha
Helix 92
92
P
33 48Right-handed alpha
Helix 93
93
P
51 63Right-handed alpha
Helix 94
94
P
64 78Right-handed alpha
Helix 95
95
P
89 95Right-handed alpha
Helix 96
96
P
108 129Right-handed alpha
Helix 97
97
Q
16 26Right-handed alpha
Helix 98
98
Q
33 48Right-handed alpha
Helix 99
99
Q
51 63Right-handed alpha
Helix 100
100
Q
64 78Right-handed alpha
Helix 101
101
Q
89 95Right-handed alpha
Helix 102
102
Q
108 129Right-handed alpha
Helix 103
103
R
16 25Right-handed alpha
Helix 104
104
R
33 48Right-handed alpha
Helix 105
105
R
51 63Right-handed alpha
Helix 106
106
R
64 78Right-handed alpha
Helix 107
107
R
89 97Right-handed alpha
Helix 108
108
R
108 131Right-handed alpha
Helix 109
109
S
16 26Right-handed alpha
Helix 110
110
S
33 48Right-handed alpha
Helix 111
111
S
51 63Right-handed alpha
Helix 112
112
S
64 77Right-handed alpha
Helix 113
113
S
89 97Right-handed alpha
Helix 114
114
S
108 132Right-handed alpha
Helix 115
115
T
16 25Right-handed alpha
Helix 116
116
T
33 49Right-handed alpha
Helix 117
117
T
51 63Right-handed alpha
Helix 118
118
T
64 77Right-handed alpha
Helix 119
119
T
89 97Right-handed alpha
Helix 120
120
T
108 130Right-handed alpha
Helix 121
121
U
16 26Right-handed alpha
Helix 122
122
U
33 48Right-handed alpha
Helix 123
123
U
51 63Right-handed alpha
Helix 124
124
U
64 78Right-handed alpha
Helix 125
125
U
92 96Right-handed 310
Helix 126
126
U
108 129Right-handed alpha
Helix 127
127
V
16 26Right-handed alpha
Helix 128
128
V
33 49Right-handed alpha
Helix 129
129
V
51 63Right-handed alpha
Helix 130
130
V
64 77Right-handed alpha
Helix 131
131
V
92 97Right-handed alpha
Helix 132
132
V
108 129Right-handed alpha
Helix 133
133
X
16 26Right-handed alpha
Helix 134
134
X
33 48Right-handed alpha
Helix 135
135
X
51 63Right-handed alpha
Helix 136
136
X
64 77Right-handed alpha
Helix 137
137
X
89 97Right-handed alpha
Helix 138
138
X
108 129Right-handed alpha
Helix 139
139
Y
16 25Right-handed alpha
Helix 140
140
Y
33 48Right-handed alpha
Helix 141
141
Y
51 63Right-handed alpha
Helix 142
142
Y
64 78Right-handed alpha
Helix 143
143
Y
89 97Right-handed alpha
Helix 144
144
Y
110 131Right-handed alpha
Back to top of page

There are 24 sheets in PDB entry 3BP9. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 3first strand
Strand 2
A
11 12anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2 3first strand
Strand 2
B
11 12anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
2 4first strand
Strand 2
C
10 12anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
2 4first strand
Strand 2
D
10 12anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
2 4first strand
Strand 2
E
10 12anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
2 4first strand
Strand 2
F
10 12anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
2 3first strand
Strand 2
G
11 12anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
2 3first strand
Strand 2
H
11 12anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
2 4first strand
Strand 2
I
10 12anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
2 4first strand
Strand 2
J
10 12anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
2 4first strand
Strand 2
K
10 12anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
2 4first strand
Strand 2
L
10 12anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
2 4first strand
Strand 2
M
10 12anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
2 4first strand
Strand 2
N
10 12anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
2 3first strand
Strand 2
O
11 12anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
P
2 3first strand
Strand 2
P
11 12anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Q
2 4first strand
Strand 2
Q
10 12anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
R
2 4first strand
Strand 2
R
10 12anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
S
2 4first strand
Strand 2
S
10 12anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
T
2 4first strand
Strand 2
T
10 12anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
U
2 4first strand
Strand 2
U
10 12anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
V
2 4first strand
Strand 2
V
10 12anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
2 4first strand
Strand 2
X
10 12anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Y
2 4first strand
Strand 2
Y
10 12anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il