Analysis of interatomic Contacts of Structural Units in PDB entry:
3BPJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3BPJ entry

There are 4 chains in PDB entry 3BPJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 144GLN 213
B
 ALA 141GLN 211
C
 GLY 144GLN 216
D
 GLY 144LYS 212
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 3BPJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
152 168Right-handed alpha
Helix 2
2
A
169 171Right-handed 310
Helix 3
3
A
175 189Right-handed alpha
Helix 4
4
A
192 213Right-handed alpha
Helix 5
5
B
152 169Right-handed alpha
Helix 6
6
B
175 189Right-handed alpha
Helix 7
7
B
192 211Right-handed alpha
Helix 8
8
C
152 168Right-handed alpha
Helix 9
9
C
169 171Right-handed 310
Helix 10
10
C
175 189Right-handed alpha
Helix 11
11
C
192 216Right-handed alpha
Helix 12
12
D
152 168Right-handed alpha
Helix 13
13
D
169 171Right-handed 310
Helix 14
14
D
175 189Right-handed alpha
Helix 15
15
D
192 212Right-handed alpha
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There are no sheets in PDB entry 3BPJ
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