Analysis of interatomic Contacts of Structural Units in PDB entry:
3BRZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3BRZ entry

There is 1 chain in PDB entry 3BRZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 1PHE 433
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 3BRZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 16Right-handed alpha
Helix 2
2
A
25 32Right-handed 310
Helix 3
3
A
35 40Right-handed 310
Helix 4
4
A
113 115Right-handed 310
Helix 5
5
A
170 179Right-handed alpha
Helix 6
6
A
185 191Right-handed alpha
Helix 7
7
A
194 197Right-handed 310
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There are 6 sheets in PDB entry 3BRZ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
45 47first strand
Strand 2
A
85 90anti-parallel
Strand 3
A
93 98anti-parallel
Strand 4
A
139 144anti-parallel
Strand 5
A
149 169anti-parallel
Strand 6
A
199 203anti-parallel
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There are 12 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 108first strand
Strand 2
A
129 136anti-parallel
Strand 3
A
149 169anti-parallel
Strand 4
A
215 228anti-parallel
Strand 5
A
233 240anti-parallel
Strand 6
A
279 287anti-parallel
Strand 7
A
294 303anti-parallel
Strand 8
A
333 342anti-parallel
Strand 9
A
348 357anti-parallel
Strand 10
A
377 384anti-parallel
Strand 11
A
393 399anti-parallel
Strand 12
A
423 428anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 52first strand
Strand 2
A
80 81anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 60first strand
Strand 2
A
417 420anti-parallel
Strand 3
A
402 404anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
117 118first strand
Strand 2
A
122 123anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
182 183first strand
Strand 2
A
321 327anti-parallel
Strand 3
A
310 316anti-parallel
Strand 4
A
263 273anti-parallel
Strand 5
A
248 257anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il