Analysis of interatomic Contacts of Structural Units in PDB entry:
3BS8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3BS8 entry

There is 1 chain in PDB entry 3BS8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ARG 430
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 3BS8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 16Right-handed alpha
Helix 2
2
A
17 22Right-handed 310
Helix 3
3
A
24 29Right-handed 310
Helix 4
4
A
59 63Right-handed 310
Helix 5
5
A
71 85Right-handed alpha
Helix 6
6
A
92 106Right-handed alpha
Helix 7
7
A
117 134Right-handed alpha
Helix 8
8
A
149 152Right-handed 310
Helix 9
9
A
186 198Right-handed alpha
Helix 10
10
A
221 234Right-handed alpha
Helix 11
11
A
251 257Right-handed alpha
Helix 12
12
A
267 272Right-handed 310
Helix 13
13
A
282 287Right-handed alpha
Helix 14
14
A
304 317Right-handed alpha
Helix 15
15
A
319 344Right-handed alpha
Helix 16
16
A
368 373Right-handed alpha
Helix 17
17
A
376 390Right-handed alpha
Helix 18
18
A
409 430Right-handed alpha
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There are 4 sheets in PDB entry 3BS8. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 43first strand
Strand 2
A
46 49anti-parallel
Strand 3
A
54 57anti-parallel
Strand 4
A
392 393parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 115first strand
Strand 2
A
277 281anti-parallel
Strand 3
A
263 266anti-parallel
Strand 4
A
236 240parallel
Strand 5
A
201 206parallel
Strand 6
A
137 142parallel
Strand 7
A
179 183parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
154 155first strand
Strand 2
A
165 166anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
349 353first strand
Strand 2
A
356 360anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il