Analysis of interatomic Contacts of Structural Units in PDB entry:
3BSF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3BSF entry

There are 2 chains in PDB entry 3BSF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 11LEU 254
B
 ARG 11LEU 254
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 3BSF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
22 34Right-handed alpha
Helix 2
2
A
78 92Right-handed alpha
Helix 3
3
A
108 111Right-handed 310
Helix 4
4
A
134 141Right-handed alpha
Helix 5
5
A
148 155Right-handed alpha
Helix 6
6
A
171 181Right-handed alpha
Helix 7
7
A
189 200Right-handed alpha
Helix 8
8
A
226 247Right-handed alpha
Helix 9
9
B
22 34Right-handed alpha
Helix 10
10
B
78 92Right-handed alpha
Helix 11
11
B
108 111Right-handed 310
Helix 12
12
B
134 141Right-handed alpha
Helix 13
13
B
148 155Right-handed alpha
Helix 14
14
B
171 181Right-handed alpha
Helix 15
15
B
189 200Right-handed alpha
Helix 16
16
B
221 226Right-handed alpha
Helix 17
17
B
229 247Right-handed alpha
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There are 4 sheets in PDB entry 3BSF. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 38first strand
Strand 2
A
50 56anti-parallel
Strand 3
A
59 65anti-parallel
Strand 4
A
15 19parallel
Strand 5
A
97 106parallel
Strand 6
A
185 187anti-parallel
Strand 7
A
158 164parallel
Strand 8
A
117 125parallel
Strand 9
A
143 144anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 38first strand
Strand 2
A
50 56anti-parallel
Strand 3
A
59 65anti-parallel
Strand 4
A
15 19parallel
Strand 5
A
97 106parallel
Strand 6
A
204 213parallel
Strand 7
A
117 125anti-parallel
Strand 8
A
143 144anti-parallel
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There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
36 38first strand
Strand 2
B
50 56anti-parallel
Strand 3
B
59 65anti-parallel
Strand 4
B
15 19parallel
Strand 5
B
97 106parallel
Strand 6
B
185 187anti-parallel
Strand 7
B
158 164parallel
Strand 8
B
117 125parallel
Strand 9
B
143 144anti-parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
36 38first strand
Strand 2
B
50 56anti-parallel
Strand 3
B
59 65anti-parallel
Strand 4
B
15 19parallel
Strand 5
B
97 106parallel
Strand 6
B
204 213parallel
Strand 7
B
117 125anti-parallel
Strand 8
B
143 144anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il