Analysis of interatomic Contacts of Structural Units in PDB entry:
3BTV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3BTV entry

There are 2 chains in PDB entry 3BTV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 16LEU 435
B
 ALA 16TYR 433
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 3BTV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
35 43Right-handed alpha
Helix 2
2
A
56 67Right-handed alpha
Helix 3
3
A
77 84Right-handed alpha
Helix 4
4
A
95 97Right-handed 310
Helix 5
5
A
98 110Right-handed alpha
Helix 6
6
A
111 113Right-handed 310
Helix 7
7
A
128 141Right-handed alpha
Helix 8
8
A
150 154Right-handed 310
Helix 9
9
A
155 167Right-handed alpha
Helix 10
10
A
194 199Right-handed 310
Helix 11
11
A
209 223Right-handed alpha
Helix 12
12
A
359 377Right-handed alpha
Helix 13
13
A
401 422Right-handed alpha
Helix 14
14
B
35 43Right-handed alpha
Helix 15
15
B
56 67Right-handed alpha
Helix 16
16
B
77 84Right-handed alpha
Helix 17
17
B
95 97Right-handed 310
Helix 18
18
B
98 110Right-handed alpha
Helix 19
19
B
111 113Right-handed 310
Helix 20
20
B
128 141Right-handed alpha
Helix 21
21
B
150 154Right-handed 310
Helix 22
22
B
155 167Right-handed alpha
Helix 23
23
B
194 199Right-handed 310
Helix 24
24
B
209 223Right-handed alpha
Helix 25
25
B
359 378Right-handed alpha
Helix 26
26
B
401 422Right-handed alpha
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There are 6 sheets in PDB entry 3BTV. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
73 74first strand
Strand 2
A
47 53parallel
Strand 3
A
18 23parallel
Strand 4
A
89 92parallel
Strand 5
A
118 122parallel
Strand 6
A
145 149parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
348 353first strand
Strand 2
A
316 322anti-parallel
Strand 3
A
302 306anti-parallel
Strand 4
A
292 298anti-parallel
Strand 5
A
173 181anti-parallel
Strand 6
A
273 280parallel
Strand 7
A
261 268anti-parallel
Strand 8
A
226 234anti-parallel
Strand 9
A
425 426anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
188 190first strand
Strand 2
A
239 243parallel
Strand 3
A
249 255anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
73 74first strand
Strand 2
B
47 53parallel
Strand 3
B
18 23parallel
Strand 4
B
89 92parallel
Strand 5
B
118 122parallel
Strand 6
B
145 149parallel
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There are 9 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
349 353first strand
Strand 2
B
316 321anti-parallel
Strand 3
B
302 307anti-parallel
Strand 4
B
292 298anti-parallel
Strand 5
B
173 181anti-parallel
Strand 6
B
273 280parallel
Strand 7
B
261 268anti-parallel
Strand 8
B
226 234anti-parallel
Strand 9
B
425 426anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
188 190first strand
Strand 2
B
239 243parallel
Strand 3
B
249 255anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il