Analysis of interatomic Contacts of Structural Units in PDB entry:
3BV4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3BV4 entry

There is 1 chain in PDB entry 3BV4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 4SER 344
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 3BV4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 23Right-handed alpha
Helix 2
2
A
35 45Right-handed alpha
Helix 3
3
A
51 64Right-handed alpha
Helix 4
4
A
66 70Right-handed 310
Helix 5
5
A
79 84Right-handed alpha
Helix 6
6
A
92 99Right-handed alpha
Helix 7
7
A
129 140Right-handed alpha
Helix 8
8
A
159 180Right-handed alpha
Helix 9
9
A
197 219Right-handed alpha
Helix 10
10
A
222 226Right-handed 310
Helix 11
11
A
244 258Right-handed alpha
Helix 12
12
A
275 289Right-handed alpha
Helix 13
13
A
302 314Right-handed alpha
Helix 14
14
A
316 318Right-handed 310
Helix 15
15
A
319 338Right-handed alpha
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There are 2 sheets in PDB entry 3BV4. Click on sheet of interest to get list of strands forming it: A, B,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 32first strand
Strand 2
A
73 78parallel
Strand 3
A
103 107parallel
Strand 4
A
144 151parallel
Strand 5
A
183 190parallel
Strand 6
A
227 228parallel
Strand 7
A
266 269parallel
Strand 8
A
296 301parallel
Strand 9
A
28 32parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
112 114first strand
Strand 2
A
122 124anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il