Analysis of interatomic Contacts of Structural Units in PDB entry:
3BV6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3BV6 entry

There are 6 chains in PDB entry 3BV6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 3LEU 355
B
 SER 2LEU 355
C
 LYS 3LEU 355
D
 SER 2LEU 355
E
 SER 2LEU 355
F
 SER 2LEU 355
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are101 helices in PDB entry 3BV6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 7Right-handed 310
Helix 2
2
A
8 17Right-handed alpha
Helix 3
3
A
22 30Right-handed alpha
Helix 4
4
A
80 87Right-handed alpha
Helix 5
5
A
103 107Right-handed 310
Helix 6
6
A
119 123Right-handed 310
Helix 7
7
A
124 135Right-handed alpha
Helix 8
8
A
144 155Right-handed alpha
Helix 9
9
A
157 159Right-handed 310
Helix 10
10
A
184 189Right-handed alpha
Helix 11
11
A
199 204Right-handed 310
Helix 12
12
A
205 210Right-handed alpha
Helix 13
13
A
233 241Right-handed alpha
Helix 14
14
A
262 274Right-handed alpha
Helix 15
15
A
286 290Right-handed 310
Helix 16
16
A
293 304Right-handed alpha
Helix 17
17
A
351 355Right-handed 310
Helix 18
18
B
3 7Right-handed 310
Helix 19
19
B
8 17Right-handed alpha
Helix 20
20
B
22 31Right-handed alpha
Helix 21
21
B
80 87Right-handed alpha
Helix 22
22
B
103 107Right-handed 310
Helix 23
23
B
119 123Right-handed 310
Helix 24
24
B
124 135Right-handed alpha
Helix 25
25
B
144 155Right-handed alpha
Helix 26
26
B
157 159Right-handed 310
Helix 27
27
B
184 189Right-handed alpha
Helix 28
28
B
199 204Right-handed 310
Helix 29
29
B
205 210Right-handed alpha
Helix 30
30
B
233 241Right-handed alpha
Helix 31
31
B
262 274Right-handed alpha
Helix 32
32
B
286 290Right-handed 310
Helix 33
33
B
293 304Right-handed alpha
Helix 34
34
B
351 355Right-handed 310
Helix 35
35
C
3 7Right-handed 310
Helix 36
36
C
8 17Right-handed alpha
Helix 37
37
C
22 30Right-handed alpha
Helix 38
38
C
80 87Right-handed alpha
Helix 39
39
C
103 107Right-handed 310
Helix 40
40
C
119 123Right-handed 310
Helix 41
41
C
124 135Right-handed alpha
Helix 42
42
C
144 154Right-handed alpha
Helix 43
43
C
157 159Right-handed 310
Helix 44
44
C
184 189Right-handed alpha
Helix 45
45
C
199 204Right-handed 310
Helix 46
46
C
205 210Right-handed alpha
Helix 47
47
C
233 241Right-handed alpha
Helix 48
48
C
262 274Right-handed alpha
Helix 49
49
C
286 290Right-handed 310
Helix 50
50
C
293 304Right-handed alpha
Helix 51
51
C
351 355Right-handed 310
Helix 52
52
D
2 7Right-handed alpha
Helix 53
53
D
8 17Right-handed alpha
Helix 54
54
D
22 30Right-handed alpha
Helix 55
55
D
80 87Right-handed alpha
Helix 56
56
D
103 107Right-handed 310
Helix 57
57
D
119 123Right-handed 310
Helix 58
58
D
124 135Right-handed alpha
Helix 59
59
D
144 154Right-handed alpha
Helix 60
60
D
157 159Right-handed 310
Helix 61
61
D
184 189Right-handed alpha
Helix 62
62
D
199 204Right-handed 310
Helix 63
63
D
205 210Right-handed alpha
Helix 64
64
D
233 241Right-handed alpha
Helix 65
65
D
262 274Right-handed alpha
Helix 66
66
D
286 290Right-handed 310
Helix 67
67
D
293 304Right-handed alpha
Helix 68
68
D
351 355Right-handed 310
Helix 69
69
E
8 17Right-handed alpha
Helix 70
70
E
22 30Right-handed alpha
Helix 71
71
E
80 87Right-handed alpha
Helix 72
72
E
103 107Right-handed 310
Helix 73
73
E
119 123Right-handed 310
Helix 74
74
E
124 135Right-handed alpha
Helix 75
75
E
144 154Right-handed alpha
Helix 76
76
E
157 159Right-handed 310
Helix 77
77
E
184 189Right-handed alpha
Helix 78
78
E
199 204Right-handed 310
Helix 79
79
E
205 210Right-handed alpha
Helix 80
80
E
233 241Right-handed alpha
Helix 81
81
E
262 274Right-handed alpha
Helix 82
82
E
286 290Right-handed 310
Helix 83
83
E
293 304Right-handed alpha
Helix 84
84
E
351 355Right-handed 310
Helix 85
85
F
3 7Right-handed 310
Helix 86
86
F
8 17Right-handed alpha
Helix 87
87
F
22 31Right-handed alpha
Helix 88
88
F
80 87Right-handed alpha
Helix 89
89
F
103 107Right-handed 310
Helix 90
90
F
119 123Right-handed 310
Helix 91
91
F
124 135Right-handed alpha
Helix 92
92
F
144 155Right-handed alpha
Helix 93
93
F
157 159Right-handed 310
Helix 94
94
F
184 189Right-handed alpha
Helix 95
95
F
199 204Right-handed 310
Helix 96
96
F
205 210Right-handed alpha
Helix 97
97
F
233 241Right-handed alpha
Helix 98
98
F
262 274Right-handed alpha
Helix 99
99
F
286 290Right-handed 310
Helix 100
100
F
293 304Right-handed alpha
Helix 101
101
F
351 355Right-handed 310
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There are 12 sheets in PDB entry 3BV6. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
161 163first strand
Strand 2
A
140 143parallel
Strand 3
A
112 114parallel
Strand 4
A
57 60parallel
Strand 5
A
47 52anti-parallel
Strand 6
A
38 44anti-parallel
Strand 7
A
321 324anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
169 172first strand
Strand 2
A
175 181anti-parallel
Strand 3
A
211 217anti-parallel
Strand 4
A
220 224anti-parallel
Strand 5
A
245 249parallel
Strand 6
A
277 281parallel
Strand 7
A
312 313parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
161 163first strand
Strand 2
B
140 143parallel
Strand 3
B
112 114parallel
Strand 4
B
57 60parallel
Strand 5
B
47 52anti-parallel
Strand 6
B
38 44anti-parallel
Strand 7
B
321 324anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
169 172first strand
Strand 2
B
175 181anti-parallel
Strand 3
B
211 217anti-parallel
Strand 4
B
220 224anti-parallel
Strand 5
B
245 249parallel
Strand 6
B
277 281parallel
Strand 7
B
312 313parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
161 163first strand
Strand 2
C
140 143parallel
Strand 3
C
112 114parallel
Strand 4
C
57 60parallel
Strand 5
C
47 52anti-parallel
Strand 6
C
38 44anti-parallel
Strand 7
C
321 324anti-parallel
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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
169 172first strand
Strand 2
C
175 181anti-parallel
Strand 3
C
211 217anti-parallel
Strand 4
C
220 224anti-parallel
Strand 5
C
245 249parallel
Strand 6
C
277 281parallel
Strand 7
C
312 313parallel
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There are 7 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
161 163first strand
Strand 2
D
140 143parallel
Strand 3
D
112 114parallel
Strand 4
D
57 60parallel
Strand 5
D
47 52anti-parallel
Strand 6
D
38 44anti-parallel
Strand 7
D
321 324anti-parallel
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There are 7 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
169 172first strand
Strand 2
D
175 181anti-parallel
Strand 3
D
211 217anti-parallel
Strand 4
D
220 224anti-parallel
Strand 5
D
245 249parallel
Strand 6
D
277 281parallel
Strand 7
D
312 313parallel
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There are 7 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
161 163first strand
Strand 2
E
140 143parallel
Strand 3
E
112 114parallel
Strand 4
E
57 60parallel
Strand 5
E
47 52anti-parallel
Strand 6
E
38 44anti-parallel
Strand 7
E
321 324anti-parallel
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There are 7 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
169 172first strand
Strand 2
E
175 181anti-parallel
Strand 3
E
211 217anti-parallel
Strand 4
E
220 224anti-parallel
Strand 5
E
245 249parallel
Strand 6
E
277 281parallel
Strand 7
E
312 313parallel
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There are 7 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
161 163first strand
Strand 2
F
140 143parallel
Strand 3
F
112 114parallel
Strand 4
F
57 60parallel
Strand 5
F
47 52anti-parallel
Strand 6
F
38 44anti-parallel
Strand 7
F
321 324anti-parallel
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There are 7 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
169 172first strand
Strand 2
F
175 181anti-parallel
Strand 3
F
211 217anti-parallel
Strand 4
F
220 224anti-parallel
Strand 5
F
245 249parallel
Strand 6
F
277 281parallel
Strand 7
F
312 313parallel
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