Analysis of interatomic Contacts of Structural Units in PDB entry:
3BXJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3BXJ entry

There are 2 chains in PDB entry 3BXJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 238PRO 713
B
 PRO 237PRO 719
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 3BXJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
398 401Right-handed 310
Helix 2
2
A
402 411Right-handed alpha
Helix 3
3
A
412 424Right-handed alpha
Helix 4
4
A
425 443Right-handed alpha
Helix 5
5
A
447 461Right-handed alpha
Helix 6
6
A
473 487Right-handed alpha
Helix 7
7
A
487 505Right-handed alpha
Helix 8
8
A
520 541Right-handed alpha
Helix 9
9
A
542 546Right-handed 310
Helix 10
10
A
547 564Right-handed alpha
Helix 11
11
A
566 579Right-handed alpha
Helix 12
12
A
582 589Right-handed alpha
Helix 13
13
A
601 620Right-handed alpha
Helix 14
14
A
631 633Right-handed 310
Helix 15
15
A
634 652Right-handed alpha
Helix 16
16
A
669 685Right-handed alpha
Helix 17
17
A
686 688Right-handed 310
Helix 18
18
A
689 696Right-handed alpha
Helix 19
19
A
698 710Right-handed alpha
Helix 20
20
B
398 421Right-handed alpha
Helix 21
21
B
427 443Right-handed alpha
Helix 22
22
B
447 452Right-handed alpha
Helix 23
23
B
452 461Right-handed alpha
Helix 24
24
B
464 470Right-handed 310
Helix 25
25
B
473 505Right-handed alpha
Helix 26
26
B
512 516Right-handed 310
Helix 27
27
B
517 541Right-handed alpha
Helix 28
28
B
547 563Right-handed alpha
Helix 29
29
B
566 579Right-handed alpha
Helix 30
30
B
584 589Right-handed alpha
Helix 31
31
B
590 593Right-handed 310
Helix 32
32
B
601 620Right-handed alpha
Helix 33
33
B
628 633Right-handed 310
Helix 34
34
B
634 641Right-handed alpha
Helix 35
35
B
641 652Right-handed alpha
Helix 36
36
B
669 685Right-handed alpha
Helix 37
37
B
686 688Right-handed 310
Helix 38
38
B
689 696Right-handed alpha
Helix 39
39
B
698 712Right-handed alpha
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There are 3 sheets in PDB entry 3BXJ. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
297 298first strand
Strand 2
A
242 247anti-parallel
Strand 3
A
388 393anti-parallel
Strand 4
A
345 346anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
239 240first strand
Strand 2
B
395 396anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
296 300first strand
Strand 2
B
243 248anti-parallel
Strand 3
B
387 392anti-parallel
Strand 4
B
344 345anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il