Analysis of interatomic Contacts of Structural Units in PDB entry:
3BZ5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3BZ5 entry

There is 1 chain in PDB entry 3BZ5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 53GLU 502
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 3BZ5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
62 66Right-handed alpha
Helix 2
2
A
68 79Right-handed alpha
Helix 3
3
A
89 93Right-handed alpha
Helix 4
4
A
110 114Right-handed 310
Helix 5
5
A
407 410Right-handed 310
Helix 6
6
A
412 416Right-handed 310
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There are 4 sheets in PDB entry 3BZ5. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 61first strand
Strand 2
A
86 88anti-parallel
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There are 19 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 99first strand
Strand 2
A
119 121parallel
Strand 3
A
140 142parallel
Strand 4
A
161 163parallel
Strand 5
A
182 184parallel
Strand 6
A
203 205parallel
Strand 7
A
225 227parallel
Strand 8
A
246 248parallel
Strand 9
A
267 269parallel
Strand 10
A
288 290parallel
Strand 11
A
309 311parallel
Strand 12
A
330 332parallel
Strand 13
A
352 354parallel
Strand 14
A
373 375parallel
Strand 15
A
394 396parallel
Strand 16
A
418 426parallel
Strand 17
A
493 500parallel
Strand 18
A
484 487anti-parallel
Strand 19
A
454 457anti-parallel
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There are 18 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 99first strand
Strand 2
A
119 121parallel
Strand 3
A
140 142parallel
Strand 4
A
161 163parallel
Strand 5
A
182 184parallel
Strand 6
A
203 205parallel
Strand 7
A
225 227parallel
Strand 8
A
246 248parallel
Strand 9
A
267 269parallel
Strand 10
A
288 290parallel
Strand 11
A
309 311parallel
Strand 12
A
330 332parallel
Strand 13
A
352 354parallel
Strand 14
A
373 375parallel
Strand 15
A
394 396parallel
Strand 16
A
418 426parallel
Strand 17
A
493 500parallel
Strand 18
A
481 482anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
437 440first strand
Strand 2
A
469 472anti-parallel
Strand 3
A
461 464anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il