Analysis of interatomic Contacts of Structural Units in PDB entry:
3BZB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3BZB entry

There are 2 chains in PDB entry 3BZB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 29ARG 265
B
 ARG 29ARG 265
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 3BZB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
62 74Right-handed alpha
Helix 2
2
A
75 78Right-handed 310
Helix 3
3
A
91 100Right-handed alpha
Helix 4
4
A
112 125Right-handed alpha
Helix 5
5
A
152 160Right-handed alpha
Helix 6
6
A
175 177Right-handed 310
Helix 7
7
A
178 190Right-handed alpha
Helix 8
8
A
217 226Right-handed alpha
Helix 9
9
B
62 74Right-handed alpha
Helix 10
10
B
75 78Right-handed 310
Helix 11
11
B
91 100Right-handed alpha
Helix 12
12
B
112 125Right-handed alpha
Helix 13
13
B
152 160Right-handed alpha
Helix 14
14
B
175 177Right-handed 310
Helix 15
15
B
178 190Right-handed alpha
Helix 16
16
B
214 216Right-handed 310
Helix 17
17
B
217 226Right-handed alpha
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There are 4 sheets in PDB entry 3BZB. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 34first strand
Strand 2
A
44 48anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
142 145first strand
Strand 2
A
104 109parallel
Strand 3
A
82 85parallel
Strand 4
A
166 170parallel
Strand 5
A
200 205parallel
Strand 6
A
258 264anti-parallel
Strand 7
A
229 235anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 34first strand
Strand 2
B
44 48anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
142 145first strand
Strand 2
B
104 109parallel
Strand 3
B
82 85parallel
Strand 4
B
166 170parallel
Strand 5
B
200 206parallel
Strand 6
B
257 264anti-parallel
Strand 7
B
229 238anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il