Analysis of interatomic Contacts of Structural Units in PDB entry:
3BZK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3BZK entry

There is 1 chain in PDB entry 3BZK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 730
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 46 helices in PDB entry 3BZK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1 14Right-handed alpha
Helix 2
2
A
21 35Right-handed alpha
Helix 3
3
A
37 45Right-handed alpha
Helix 4
4
A
45 50Right-handed alpha
Helix 5
5
A
53 84Right-handed alpha
Helix 6
6
A
88 98Right-handed alpha
Helix 7
7
A
100 109Right-handed alpha
Helix 8
8
A
110 112Right-handed 310
Helix 9
9
A
117 125Right-handed alpha
Helix 10
10
A
127 137Right-handed alpha
Helix 11
11
A
141 147Right-handed alpha
Helix 12
12
A
148 150Right-handed 310
Helix 13
13
A
151 155Right-handed 310
Helix 14
14
A
158 176Right-handed alpha
Helix 15
15
A
177 192Right-handed alpha
Helix 16
16
A
206 212Right-handed 310
Helix 17
17
A
220 222Right-handed 310
Helix 18
18
A
223 236Right-handed alpha
Helix 19
19
A
254 264Right-handed alpha
Helix 20
20
A
273 288Right-handed alpha
Helix 21
21
A
288 322Right-handed alpha
Helix 22
22
A
367 382Right-handed alpha
Helix 23
23
A
394 409Right-handed alpha
Helix 24
24
A
410 413Right-handed 310
Helix 25
25
A
423 429Right-handed alpha
Helix 26
26
A
430 437Right-handed alpha
Helix 27
27
A
441 456Right-handed alpha
Helix 28
28
A
456 462Right-handed alpha
Helix 29
29
A
463 464Right-handed 310
Helix 30
30
A
465 469Right-handed 310
Helix 31
31
A
479 499Right-handed alpha
Helix 32
32
A
506 511Right-handed alpha
Helix 33
33
A
517 532Right-handed alpha
Helix 34
34
A
537 543Right-handed 310
Helix 35
35
A
547 556Right-handed alpha
Helix 36
36
A
565 570Right-handed 310
Helix 37
37
A
573 575Right-handed 310
Helix 38
38
A
576 587Right-handed alpha
Helix 39
39
A
590 595Right-handed alpha
Helix 40
40
A
597 604Right-handed alpha
Helix 41
41
A
605 609Right-handed 310
Helix 42
42
A
615 628Right-handed alpha
Helix 43
43
A
638 645Right-handed alpha
Helix 44
44
A
648 652Right-handed 310
Helix 45
45
A
685 688Right-handed 310
Helix 46
46
A
694 699Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 3BZK. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
214 218first strand
Strand 2
A
193 198anti-parallel
Strand 3
A
239 244anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
353 359first strand
Strand 2
A
342 347anti-parallel
Strand 3
A
331 335anti-parallel
Strand 4
A
386 390parallel
Strand 5
A
415 419parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
500 501first strand
Strand 2
A
558 559parallel
Back to list of sheets
Back to top of page

There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
657 666first strand
Strand 2
A
669 673anti-parallel
Strand 3
A
680 683anti-parallel
Strand 4
A
718 722parallel
Strand 5
A
704 713anti-parallel
Strand 6
A
657 666anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il