Analysis of interatomic Contacts of Structural Units in PDB entry:
3BZM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3BZM entry

There is 1 chain in PDB entry 3BZM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLN 429
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 3BZM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1 16Right-handed alpha
Helix 2
2
A
39 46Right-handed alpha
Helix 3
3
A
75 85Right-handed alpha
Helix 4
4
A
132 147Right-handed alpha
Helix 5
5
A
168 186Right-handed alpha
Helix 6
6
A
206 218Right-handed alpha
Helix 7
7
A
264 276Right-handed alpha
Helix 8
8
A
280 297Right-handed alpha
Helix 9
9
A
298 300Right-handed 310
Helix 10
10
A
331 340Right-handed alpha
Helix 11
11
A
349 361Right-handed alpha
Helix 12
12
A
409 426Right-handed alpha
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There are 3 sheets in PDB entry 3BZM. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
304 305first strand
Strand 2
A
316 326anti-parallel
Strand 3
A
249 260anti-parallel
Strand 4
A
241 246anti-parallel
Strand 5
A
379 384anti-parallel
Strand 6
A
371 375anti-parallel
Strand 7
A
94 98anti-parallel
Strand 8
A
105 117anti-parallel
Strand 9
A
120 129anti-parallel
Strand 10
A
24 32anti-parallel
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There are 16 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
309 312first strand
Strand 2
A
316 326anti-parallel
Strand 3
A
249 260anti-parallel
Strand 4
A
241 246anti-parallel
Strand 5
A
379 384anti-parallel
Strand 6
A
371 375anti-parallel
Strand 7
A
94 98anti-parallel
Strand 8
A
105 117anti-parallel
Strand 9
A
62 73anti-parallel
Strand 10
A
52 56anti-parallel
Strand 11
A
222 227anti-parallel
Strand 12
A
232 238anti-parallel
Strand 13
A
388 392anti-parallel
Strand 14
A
395 404anti-parallel
Strand 15
A
190 201anti-parallel
Strand 16
A
347 348anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
160 166first strand
Strand 2
A
190 201anti-parallel
Strand 3
A
347 348anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il