Analysis of interatomic Contacts of Structural Units in PDB entry:
3C0L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3C0L entry

There is 1 chain in PDB entry 3C0L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 277
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 3C0L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
27 53Right-handed alpha
Helix 2
2
A
75 95Right-handed alpha
Helix 3
3
A
112 134Right-handed alpha
Helix 4
4
A
150 163Right-handed alpha
Helix 5
5
A
165 170Right-handed alpha
Helix 6
6
A
182 194Right-handed alpha
Helix 7
7
A
201 207Right-handed alpha
Helix 8
8
A
212 221Right-handed alpha
Helix 9
9
A
222 224Right-handed 310
Helix 10
10
A
249 258Right-handed alpha
Helix 11
11
A
272 276Right-handed 310
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There are 2 sheets in PDB entry 3C0L. Click on sheet of interest to get list of strands forming it: A, B,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 3first strand
Strand 2
A
264 268parallel
Strand 3
A
229 232parallel
Strand 4
A
197 200parallel
Strand 5
A
172 175parallel
Strand 6
A
139 143parallel
Strand 7
A
97 100parallel
Strand 8
A
56 58parallel
Strand 9
A
5 7parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 10first strand
Strand 2
A
15 16anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il