Analysis of interatomic Contacts of Structural Units in PDB entry:
3C10


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3C10 entry

There are 3 chains in PDB entry 3C10 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 515ARG 900
B
 LEU 516LEU 901
C
 THR 519GLN 899
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 61 helices in PDB entry 3C10. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
525 531Right-handed 310
Helix 2
2
A
537 541Right-handed 310
Helix 3
3
A
545 558Right-handed alpha
Helix 4
4
A
560 564Right-handed 310
Helix 5
5
A
573 578Right-handed alpha
Helix 6
6
A
582 591Right-handed alpha
Helix 7
7
A
600 610Right-handed alpha
Helix 8
8
A
633 654Right-handed alpha
Helix 9
9
A
683 696Right-handed alpha
Helix 10
10
A
711 719Right-handed alpha
Helix 11
11
A
749 753Right-handed 310
Helix 12
12
A
770 781Right-handed alpha
Helix 13
13
A
781 790Right-handed alpha
Helix 14
14
A
807 811Right-handed 310
Helix 15
15
A
816 828Right-handed alpha
Helix 16
16
A
829 833Right-handed 310
Helix 17
17
A
844 861Right-handed alpha
Helix 18
18
A
865 869Right-handed 310
Helix 19
19
A
870 874Right-handed 310
Helix 20
20
A
877 892Right-handed alpha
Helix 21
21
A
893 894Right-handed 310
Helix 22
22
A
895 899Right-handed 310
Helix 23
23
B
525 531Right-handed 310
Helix 24
24
B
545 558Right-handed alpha
Helix 25
25
B
560 564Right-handed 310
Helix 26
26
B
573 579Right-handed alpha
Helix 27
27
B
582 591Right-handed alpha
Helix 28
28
B
633 654Right-handed alpha
Helix 29
29
B
683 695Right-handed alpha
Helix 30
30
B
711 719Right-handed alpha
Helix 31
31
B
733 736Right-handed 310
Helix 32
32
B
749 753Right-handed 310
Helix 33
33
B
770 781Right-handed alpha
Helix 34
34
B
781 790Right-handed alpha
Helix 35
35
B
816 828Right-handed alpha
Helix 36
36
B
829 833Right-handed 310
Helix 37
37
B
844 860Right-handed alpha
Helix 38
38
B
877 892Right-handed alpha
Helix 39
39
B
893 894Right-handed 310
Helix 40
40
B
895 899Right-handed 310
Helix 41
41
C
525 531Right-handed 310
Helix 42
42
C
545 558Right-handed alpha
Helix 43
43
C
560 564Right-handed 310
Helix 44
44
C
573 578Right-handed alpha
Helix 45
45
C
582 591Right-handed alpha
Helix 46
46
C
633 654Right-handed alpha
Helix 47
47
C
683 695Right-handed alpha
Helix 48
48
C
711 718Right-handed alpha
Helix 49
49
C
733 736Right-handed 310
Helix 50
50
C
749 753Right-handed 310
Helix 51
51
C
770 781Right-handed alpha
Helix 52
52
C
781 790Right-handed alpha
Helix 53
53
C
807 811Right-handed 310
Helix 54
54
C
816 828Right-handed alpha
Helix 55
55
C
829 833Right-handed 310
Helix 56
56
C
844 860Right-handed alpha
Helix 57
57
C
865 869Right-handed 310
Helix 58
58
C
870 874Right-handed 310
Helix 59
59
C
877 892Right-handed alpha
Helix 60
60
C
893 894Right-handed 310
Helix 61
61
C
895 899Right-handed 310
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There are 5 sheets in PDB entry 3C10. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
565 567first strand
Strand 2
A
520 523parallel
Strand 3
A
659 662parallel
Strand 4
A
835 839parallel
Strand 5
A
793 798parallel
Strand 6
A
701 705parallel
Strand 7
A
724 731parallel
Strand 8
A
756 761parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
621 622first strand
Strand 2
A
628 629anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
565 567first strand
Strand 2
B
520 523parallel
Strand 3
B
659 662parallel
Strand 4
B
835 839parallel
Strand 5
B
793 798parallel
Strand 6
B
701 705parallel
Strand 7
B
724 731parallel
Strand 8
B
756 761parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
621 622first strand
Strand 2
B
628 629anti-parallel
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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
565 567first strand
Strand 2
C
520 523parallel
Strand 3
C
659 662parallel
Strand 4
C
835 839parallel
Strand 5
C
793 798parallel
Strand 6
C
701 705parallel
Strand 7
C
724 731parallel
Strand 8
C
756 761parallel
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